RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ACTN1P12814 892 aa19.06■□□□□ 0.64
MCF2L-208ENST00000397030 POLR2FP61218 127 aaKnown RBP19.06■□□□□ 0.64
MCF2L-208ENST00000397030 ATP6V0A1Q93050 837 aa19.06■□□□□ 0.64
MCF2L-208ENST00000397030 ZNF341Q9BYN7 854 aa19.06■□□□□ 0.64
MCF2L-208ENST00000397030 PHBP35232 272 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 GUCY2FP51841 1108 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 ATL3Q6DD88 541 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 GBP7Q8N8V2 638 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-208ENST00000397030 PRIMPOLQ96LW4 560 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 IFIH1Q9BYX4 1025 aaKnown RBP19.05■□□□□ 0.64
MCF2L-208ENST00000397030 PPP1R12CQ9BZL4 782 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 ATP10BO94823 1461 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 SOX5P35711 763 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 PNMA8AQ86V59 439 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-208ENST00000397030 UHMK1Q8TAS1 419 aaKnown RBP19.05■□□□□ 0.64
MCF2L-208ENST00000397030 LLPHQ9BRT6 129 aaKnown RBP19.05■□□□□ 0.64
MCF2L-208ENST00000397030 SEC31BQ9NQW1 1179 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 PTPN22Q9Y2R2 807 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 ADALQ6DHV7 355 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 RMDN2Q96LZ7 410 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 PNMA3Q9UL41 463 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 ARHGAP42A6NI28 874 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 SGK1O00141 431 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 KCNK3O14649 394 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 SZRD1Q7Z422 152 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 DYNLT1P63172 113 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 SIX6OS1Q8N1H7 587 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 MAP3K15Q6ZN16 1313 aa19.05■□□□□ 0.64
MCF2L-208ENST00000397030 USP17L3A6NCW0 530 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 USP17L4A6NCW7 530 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 SRGAP2BP0DMP2 458 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 USP17L1Q7RTZ2 530 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 N4BP1O75113 896 aaKnown RBP19.04■□□□□ 0.64
MCF2L-208ENST00000397030 TTLL1O95922 423 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 CD58P19256 250 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.04■□□□□ 0.64
MCF2L-208ENST00000397030 CACNA2D3Q8IZS8 1091 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 GOLGA5Q8TBA6 731 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 LRRC4Q9HBW1 653 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 NEMP1O14524 444 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 CC2D2BQ6DHV5 1058 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 MIS12Q9H081 205 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 VCXQ9H320 206 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 MMEL1Q495T6 779 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 MIPOL1Q8TD10 442 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 CACTINQ8WUQ7 758 aaKnown RBP19.04■□□□□ 0.64
MCF2L-208ENST00000397030 RPRD2Q5VT52 1461 aaKnown RBP19.04■□□□□ 0.64
MCF2L-208ENST00000397030 GBP1P32455 592 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 GARSP41250 739 aaKnown RBP19.04■□□□□ 0.64
MCF2L-208ENST00000397030 NSFP46459 744 aaKnown RBP19.04■□□□□ 0.64
MCF2L-208ENST00000397030 RWDD4Q6NW29 188 aaKnown RBP19.04■□□□□ 0.64
MCF2L-208ENST00000397030 AMNQ9BXJ7 453 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 NFE2L3Q9Y4A8 694 aa19.04■□□□□ 0.64
MCF2L-208ENST00000397030 MMP10P09238 476 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 PCK1P35558 622 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 ADAM9Q13443 819 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 FAM114A2Q9NRY5 505 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 RAB44Q7Z6P3 723 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-208ENST00000397030 SYNDIG1LA6NDD5 238 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 ADORA1P30542 326 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 PHKA1P46020 1223 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 COL4A3BPQ9Y5P4 624 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 MLKLQ8NB16 471 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 AFAP1L1Q8TED9 768 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 KCNJ18B7U540 433 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 MORC3Q14149 939 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 KCNJ12Q14500 433 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 HEXIM2Q96MH2 286 aaKnown RBP19.03■□□□□ 0.64
MCF2L-208ENST00000397030 ATICP31939 592 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 RFC1P35251 1148 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-208ENST00000397030 YWHAGP61981 247 aaKnown RBP eCLIP19.03■□□□□ 0.64
MCF2L-208ENST00000397030 EXOC8Q8IYI6 725 aa19.03■□□□□ 0.64
MCF2L-208ENST00000397030 ARMCX3Q9UH62 379 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-208ENST00000397030 ABCC10Q5T3U5 1492 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 SCG2P13521 617 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 RASGRP4Q8TDF6 673 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 PPP2R5BQ15173 497 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 CFAP221Q4G0U5 840 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 YAF2Q8IY57 180 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 RTKN2Q8IZC4 609 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 P3H4Q92791 437 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 GDAP1L1Q96MZ0 367 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 DPH5Q9H2P9 285 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 ZBTB40Q9NUA8 1239 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 ZNF148Q9UQR1 794 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 EDC4Q6P2E9 1401 aaKnown RBP19.02■□□□□ 0.64
MCF2L-208ENST00000397030 HOXD10P28358 340 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 BRD3Q15059 726 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 SYDE2Q5VT97 1194 aa19.02■□□□□ 0.64
MCF2L-208ENST00000397030 KIF3CO14782 793 aa19.02■□□□□ 0.63
MCF2L-208ENST00000397030 RAET1EQ8TD07 263 aa19.02■□□□□ 0.63
MCF2L-208ENST00000397030 PDE1CQ14123 709 aaPredicted RBP19.02■□□□□ 0.63
MCF2L-208ENST00000397030 HOXA13P31271 388 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-208ENST00000397030 DNAAF3Q8N9W5 541 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 GRK7Q8WTQ7 553 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 DDX27Q96GQ7 796 aaKnown RBP19.01■□□□□ 0.63
MCF2L-208ENST00000397030 TTC25Q96NG3 672 aa19.01■□□□□ 0.63
MCF2L-208ENST00000397030 LARSQ9P2J5 1176 aaKnown RBP19.01■□□□□ 0.63
MCF2L-208ENST00000397030 ANKRD20A3Q5VUR7 823 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms