RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 TCP10Q12799 353 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 PRR16Q569H4 304 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 FAM102BQ5T8I3 360 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 SLFN12LQ6IEE8 588 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 RAB3IPQ96QF0 476 aaPredicted RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 KIAA1586Q9HCI6 787 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 KCNK9Q9NPC2 374 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 KCNJ14Q9UNX9 436 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 NOC2LQ9Y3T9 749 aaKnown RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 SAR1BQ9Y6B6 198 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 CRB1P82279 1406 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 TRIM28Q13263 835 aaKnown RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 FAM47AQ5JRC9 791 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 ARMCX5Q6P1M9 558 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.15■□□□□ 0.34
GNE-202ENST00000396594 FAM193BQ96PV7 902 aaPredicted RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 HARSP12081 509 aaKnown RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 GSDMBQ8TAX9 411 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 LARP4BQ92615 738 aaKnown RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 ANKRD36BP1Q96IX9 119 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 VCXQ9H320 206 aa17.15■□□□□ 0.34
GNE-202ENST00000396594 CACYBPQ9HB71 228 aaKnown RBP17.15■□□□□ 0.34
GNE-202ENST00000396594 TMEM232C9JQI7 657 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 SH2B2O14492 632 aaPredicted RBP17.14■□□□□ 0.34
GNE-202ENST00000396594 H2AFZP0C0S5 128 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 PTK2Q05397 1052 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 SYDE2Q5VT97 1194 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 H2AFVQ71UI9 128 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 KCTD17Q8N5Z5 321 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 SLC7A3Q8WY07 619 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 NT5C1BQ96P26 610 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 THAP9Q9H5L6 903 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 PKD2L1Q9P0L9 805 aa17.14■□□□□ 0.34
GNE-202ENST00000396594 DIS3Q9Y2L1 958 aaKnown RBP17.14■□□□□ 0.34
GNE-202ENST00000396594 NFKBIAP25963 317 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 PODNQ7Z5L7 613 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 GOLGA8KD6RF30 607 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 LDHAP00338 332 aaKnown RBP17.14■□□□□ 0.33
GNE-202ENST00000396594 SRGAP2BP0DMP2 458 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
GNE-202ENST00000396594 DAAM2Q86T65 1068 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 METTL23Q86XA0 190 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
GNE-202ENST00000396594 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 JAG2Q9Y219 1238 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 ZBTB1Q9Y2K1 713 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 TESPA1A2RU30 521 aaPredicted RBP17.14■□□□□ 0.33
GNE-202ENST00000396594 ASPHQ12797 758 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 KYAT1Q16773 422 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 SPATA31A6Q5VVP1 1343 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
GNE-202ENST00000396594 CEP104O60308 925 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 GARSP41250 739 aaKnown RBP17.13■□□□□ 0.33
GNE-202ENST00000396594 STAT2P52630 851 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 LRCH2Q5VUJ6 765 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 KIAA1210Q9ULL0 1709 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 PNMA6FA0A0J9YX94 578 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 PSAPP07602 524 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 PHKA1P46020 1223 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 CACNA2D3Q8IZS8 1091 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 SLC12A2P55011 1212 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 LRRC63Q05C16 580 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 LRRC24Q50LG9 513 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 GTF3C2Q8WUA4 911 aaPredicted RBP17.13■□□□□ 0.33
GNE-202ENST00000396594 STAG1Q8WVM7 1258 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 STMN2Q93045 179 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 ASNSP08243 561 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 SCP2P22307 547 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 PRPSAP1Q14558 356 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 ZNF658Q5TYW1 1059 aaPredicted RBP17.13■□□□□ 0.33
GNE-202ENST00000396594 TRIM50Q86XT4 487 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 TRIM42Q8IWZ5 723 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 TDRD7Q8NHU6 1098 aaKnown RBP17.13■□□□□ 0.33
GNE-202ENST00000396594 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 PRR36Q9H6K5 1346 aa17.13■□□□□ 0.33
GNE-202ENST00000396594 HSP90AA4PQ58FG1 418 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 DENND2CQ68D51 928 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
GNE-202ENST00000396594 ZC3H15Q8WU90 426 aaKnown RBP17.12■□□□□ 0.33
GNE-202ENST00000396594 RNF8O76064 485 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 MAN2A1Q16706 1144 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
GNE-202ENST00000396594 HHATQ5VTY9 493 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 CCDC25Q86WR0 208 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 APOBEC3FQ8IUX4 373 aaKnown RBP17.12■□□□□ 0.33
GNE-202ENST00000396594 RBSNQ9H1K0 784 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 TYW5A2RUC4 315 aaKnown RBP17.12■□□□□ 0.33
GNE-202ENST00000396594 MMP1P03956 469 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 CPA1P15085 419 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 ATP11AP98196 1134 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 GPR162Q16538 588 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 CCDC62Q6P9F0 684 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 GADL1Q6ZQY3 521 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 RRAGAQ7L523 313 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 CCDC105Q8IYK2 499 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms