RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 LGALS16A8MUM7 142 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 IRS4O14654 1257 aaPredicted RBP10.95□□□□□ -0.66
TRIM39-203ENST00000396547 ADRA2BP18089 450 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 USP8P40818 1118 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 CFAP58Q5T655 872 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 C8orf74Q6P047 294 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 SUGP1Q8IWZ8 645 aaKnown RBP10.95□□□□□ -0.66
TRIM39-203ENST00000396547 RNPC3Q96LT9 517 aaKnown RBP10.95□□□□□ -0.66
TRIM39-203ENST00000396547 STK32BQ9NY57 414 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 CAPN11Q9UMQ6 739 aa10.95□□□□□ -0.66
TRIM39-203ENST00000396547 TCRBV5S4A2TA0A5A2 114 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 GOLGA8KD6RF30 607 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
TRIM39-203ENST00000396547 FAM153BP0C7A2 387 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 GUCY2DQ02846 1103 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 FAM153CQ494X1 144 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 CT47A1Q5JQC4 288 aaPredicted RBP10.94□□□□□ -0.66
TRIM39-203ENST00000396547 FAM47AQ5JRC9 791 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 CREG2Q8IUH2 290 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 DNAJC10Q8IXB1 793 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 EXOC1Q9NV70 894 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 FAM153AQ9UHL3 310 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 DLEC1Q9Y238 1755 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 FRMD3A2A2Y4 597 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 E7EVH7 732 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 PSMA7O14818 248 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 CPP00450 1065 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 ATP6V1AP38606 617 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 UBA7P41226 1012 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 CARSP49589 748 aaKnown RBP10.94□□□□□ -0.66
TRIM39-203ENST00000396547 ARID5AQ03989 594 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 PDXDC2PQ6P474 469 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 POTEDQ86YR6 584 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 AMOTL1Q8IY63 956 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 TMTC2Q8N394 836 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 GIMAP7Q8NHV1 300 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 AENQ8WTP8 325 aaKnown RBP10.94□□□□□ -0.66
TRIM39-203ENST00000396547 NOC3LQ8WTT2 800 aaKnown RBP10.94□□□□□ -0.66
TRIM39-203ENST00000396547 GPKOWQ92917 476 aaPredicted RBP eCLIP10.94□□□□□ -0.66
TRIM39-203ENST00000396547 PHF20Q9BVI0 1012 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 EPB41L5Q9HCM4 733 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 RMND1Q9NWS8 449 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 SNX12Q9UMY4 172 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 GRIN2DO15399 1336 aa10.94□□□□□ -0.66
TRIM39-203ENST00000396547 ZNF263O14978 683 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 EVX2Q03828 476 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 TRADDQ15628 312 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 ENAHQ8N8S7 591 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 ESR2Q92731 530 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 RPGRIP1Q96KN7 1286 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 CEP89Q96ST8 783 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 ISCA1Q9BUE6 129 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 RBM12Q9NTZ6 932 aaKnown RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 PACSIN2Q9UNF0 486 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 SHOX2O60902 331 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 FECHP22830 423 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 EIF4A3P38919 411 aaKnown RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 DNM2P50570 870 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 RASSF7Q02833 373 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 HLTFQ14527 1009 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 TDRD12Q587J7 1177 aaKnown RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 ZBTB38Q8NAP3 1195 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 ACSBG1Q96GR2 724 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 CABS1Q96KC9 395 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 OSBPL9Q96SU4 736 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 DNAJC7Q99615 494 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 RNF26Q9BY78 433 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 TANGO6Q9C0B7 1094 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 PCCAP05165 728 aaPredicted RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 MAGEA1P43355 309 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 VAV2P52735 878 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 ODF2Q5BJF6 829 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 RRAGAQ7L523 313 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 KLHL7Q8IXQ5 586 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 CNOT6LQ96LI5 555 aaKnown RBP10.93□□□□□ -0.66
TRIM39-203ENST00000396547 SCLT1Q96NL6 688 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 PCDHA13Q9Y5I0 950 aa10.93□□□□□ -0.66
TRIM39-203ENST00000396547 PNPLA7Q6ZV29 1317 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 ATP2C1P98194 919 aaPredicted RBP10.92□□□□□ -0.66
TRIM39-203ENST00000396547 PDE4DQ08499 809 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 B4GALNT4Q76KP1 1039 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 TICAM2Q86XR7 235 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 ADSSL1Q8N142 457 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 RNF41Q9H4P4 317 aaPredicted RBP10.92□□□□□ -0.66
TRIM39-203ENST00000396547 STIM2Q9P246 746 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 FCER1AP12319 257 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 DYNLL1P63167 89 aaKnown RBP10.92□□□□□ -0.66
TRIM39-203ENST00000396547 ASIC1P78348 528 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 HDLBPQ00341 1268 aaKnown RBP10.92□□□□□ -0.66
TRIM39-203ENST00000396547 E2F5Q15329 346 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 KIRREL3Q8IZU9 778 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 STAG1Q8WVM7 1258 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 ZSCAN10Q96SZ4 725 aaPredicted RBP10.92□□□□□ -0.66
TRIM39-203ENST00000396547 NLRC4Q9NPP4 1024 aa10.92□□□□□ -0.66
TRIM39-203ENST00000396547 LOC102724428A0A0B4J2F2 783 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 FTCDO95954 541 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 GLI1P08151 1106 aa10.91□□□□□ -0.66
TRIM39-203ENST00000396547 LSP1P33241 339 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms