RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CACNB1Q02641 598 aaPredicted RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 SF3A3Q12874 501 aaKnown RBP eCLIP10.41□□□□□ -0.74
NDE1-201ENST00000396354 LRRC41Q15345 812 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 CCDC96Q2M329 555 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 COL23A1Q86Y22 540 aaPredicted RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 CNGA4Q8IV77 575 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 CERS5Q8N5B7 392 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 ANKZF1Q9H8Y5 726 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 MARCH6O60337 910 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 IPO7O95373 1038 aaKnown RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 TXKP42681 527 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 DNAAF5Q86Y56 855 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 CSGALNACT2Q8N6G5 542 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 CCDC155Q8N6L0 562 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 MMRN2Q9H8L6 949 aa10.41□□□□□ -0.74
NDE1-201ENST00000396354 LUC7L2Q9Y383 392 aaKnown RBP10.41□□□□□ -0.74
NDE1-201ENST00000396354 MYH1P12882 1939 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 RIMBP2O15034 1052 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 PARP1P09874 1014 aaKnown RBP10.4□□□□□ -0.74
NDE1-201ENST00000396354 TSPY3P0CV98 308 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 TSPY8P0CW00 308 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 C2orf54Q08AI8 447 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 PICALMQ13492 652 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 MSL1Q68DK7 614 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 USP17L2Q6R6M4 530 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 PROCA1Q8NCQ7 364 aaPredicted RBP10.4□□□□□ -0.74
NDE1-201ENST00000396354 PNMA1Q8ND90 353 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 LRRC15Q8TF66 581 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 RABGGTAQ92696 567 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 CRACR2AQ9BSW2 395 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 DEF6Q9H4E7 631 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 CALCOCO1Q9P1Z2 691 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 BIN2Q9UBW5 565 aaPredicted RBP10.4□□□□□ -0.74
NDE1-201ENST00000396354 PCDHAC2Q9Y5I4 1007 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 FLT1P17948 1338 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 FRMPD2Q68DX3 1309 aaPredicted RBP10.4□□□□□ -0.74
NDE1-201ENST00000396354 GOLGA6L9A6NEM1 432 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 IL1R1P14778 569 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 TCP11X2Q5H9J9 407 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 DTHD1Q6ZMT9 781 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 APTXQ7Z2E3 356 aaKnown RBP10.4□□□□□ -0.74
NDE1-201ENST00000396354 TRMT1LQ7Z2T5 733 aaKnown RBP10.4□□□□□ -0.74
NDE1-201ENST00000396354 TMC4Q7Z404 712 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 WDR66Q8TBY9 1149 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.74
NDE1-201ENST00000396354 KCNQ5Q9NR82 932 aa10.4□□□□□ -0.74
NDE1-201ENST00000396354 EPN1Q9Y6I3 576 aaPredicted RBP10.4□□□□□ -0.74
NDE1-201ENST00000396354 NRXN2Q9P2S2 1712 aa10.4□□□□□ -0.75
NDE1-201ENST00000396354 FOCADQ5VW36 1801 aa10.4□□□□□ -0.75
NDE1-201ENST00000396354 IBSPP21815 317 aaPredicted RBP10.39□□□□□ -0.75
NDE1-201ENST00000396354 PDE4DQ08499 809 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 TBC1D8BQ0IIM8 1120 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 PFKFB3Q16875 520 aaPredicted RBP10.39□□□□□ -0.75
NDE1-201ENST00000396354 MFSD14BQ5SR56 506 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 ZNF804AQ7Z570 1209 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 MMS19Q96T76 1030 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 LACRTQ9GZZ8 138 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 MYO6Q9UM54 1294 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 MYO1BO43795 1136 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 ERCC5P28715 1186 aaPredicted RBP10.39□□□□□ -0.75
NDE1-201ENST00000396354 NAPAP54920 295 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 PPP4CP60510 307 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 APBA1Q02410 837 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 SHROOM1Q2M3G4 852 aaPredicted RBP10.39□□□□□ -0.75
NDE1-201ENST00000396354 C15orf52Q6ZUT6 534 aaKnown RBP10.39□□□□□ -0.75
NDE1-201ENST00000396354 TMEM47Q9BQJ4 181 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 CENPHQ9H3R5 247 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 NLRC4Q9NPP4 1024 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 DDX4Q9NQI0 724 aaKnown RBP10.39□□□□□ -0.75
NDE1-201ENST00000396354 RBM28Q9NW13 759 aaKnown RBP10.39□□□□□ -0.75
NDE1-201ENST00000396354 GGA1Q9UJY5 639 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 STK24Q9Y6E0 443 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 M0R2N6 131 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 BUB1O43683 1085 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 NDUFA10O95299 355 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 CASP8Q14790 479 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 LEKR1Q6ZMV7 388 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 C4orf32Q8N8J7 132 aa10.39□□□□□ -0.75
NDE1-201ENST00000396354 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 LRRIQ3A6PVS8 624 aaPredicted RBP10.38□□□□□ -0.75
NDE1-201ENST00000396354 NCK2O43639 380 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 SLC15A2Q16348 729 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 CYP26C1Q6V0L0 522 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 RSRC2Q7L4I2 434 aaKnown RBP10.38□□□□□ -0.75
NDE1-201ENST00000396354 BLIDQ8IZY5 108 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 GSDMAQ96QA5 445 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 CTAGE1Q96RT6 745 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 TMEM51Q9NW97 253 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 TMEM260Q9NX78 707 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 GPR75-ASB3A0A0A6YYF3 556 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 ERLIN1O75477 346 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 PCP11498 1178 aaKnown RBP10.38□□□□□ -0.75
NDE1-201ENST00000396354 HOXA10P31260 410 aaPredicted RBP10.38□□□□□ -0.75
NDE1-201ENST00000396354 TDRD12Q587J7 1177 aaKnown RBP10.38□□□□□ -0.75
NDE1-201ENST00000396354 NT5DC1Q5TFE4 455 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 C2CD5Q86YS7 1000 aa10.38□□□□□ -0.75
NDE1-201ENST00000396354 ZNF444Q8N0Y2 327 aaPredicted RBP10.38□□□□□ -0.75
NDE1-201ENST00000396354 GOLGA6L1Q8N7Z2 621 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms