RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 SMC1BQ8NDV3 1235 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 PI4K2BQ8TCG2 481 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 PPP1R14BQ96C90 147 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 CCDC51Q96ER9 411 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 MTA3Q9BTC8 594 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 TBC1D7Q9P0N9 293 aa10.69□□□□□ -0.7
CDRT1-204ENST00000395906 BARX2Q9UMQ3 279 aaPredicted RBP10.69□□□□□ -0.7
CDRT1-204ENST00000395906 PRC1O43663 620 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 PFDN1O60925 122 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 ABL1P00519 1130 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 NQO1P15559 274 aaKnown RBP10.68□□□□□ -0.7
CDRT1-204ENST00000395906 FECHP22830 423 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 BPIFB4P59827 614 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 PHEXP78562 749 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 KIF5AQ12840 1032 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 FLIIQ13045 1269 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 PAK2Q13177 524 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 PKN1Q16512 942 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 SPTY2D1Q68D10 685 aaPredicted RBP10.68□□□□□ -0.7
CDRT1-204ENST00000395906 TMEM154Q6P9G4 183 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 IFT43Q96FT9 208 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 MPHOSPH6Q99547 160 aaKnown RBP10.68□□□□□ -0.7
CDRT1-204ENST00000395906 ZNHIT6Q9NWK9 470 aaKnown RBP10.68□□□□□ -0.7
CDRT1-204ENST00000395906 ASAP1Q9ULH1 1129 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 PCDH11XQ9BZA7 1347 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 PCDH11YQ9BZA8 1340 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 USO1O60763 962 aaKnown RBP10.68□□□□□ -0.7
CDRT1-204ENST00000395906 GSTA2P09210 222 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 TNFRSF8P28908 595 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 KLC1Q07866 573 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 ADCY1Q08828 1119 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 NR1I3Q14994 352 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 TMTC1Q8IUR5 882 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 SPICE1Q8N0Z3 855 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 CAPZA3Q96KX2 299 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 SIL1Q9H173 461 aa10.68□□□□□ -0.7
CDRT1-204ENST00000395906 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDRT1-204ENST00000395906 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
CDRT1-204ENST00000395906 IFIT3O14879 490 aaKnown RBP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 HARSP12081 509 aaKnown RBP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 ZNF18P17022 549 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 ATP6V1C1P21283 382 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 PCK1P35558 622 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 SLC7A5Q01650 507 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 RBL2Q08999 1139 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 MEX3CQ5U5Q3 659 aaKnown RBP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 RNF220Q5VTB9 566 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 NCCRP1Q6ZVX7 275 aaPredicted RBP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 IQCF2Q8IXL9 164 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 TTC5Q8N0Z6 440 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 KCNG4Q8TDN1 519 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 RBM8AQ9Y5S9 174 aaKnown RBP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 MFAP3LO75121 409 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 ATP1A1P05023 1023 aaKnown RBP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 ALOX15P16050 662 aaPredicted RBP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 PSMD7P51665 324 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 ATP8B2P98198 1209 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 SH2D4BQ5SQS7 431 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 ZNF280DQ6N043 979 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 C16orf87Q6PH81 154 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 CEP128Q6ZU80 1094 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 CACNA2D4Q7Z3S7 1137 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 ANKS4BQ8N8V4 417 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 WDR66Q8TBY9 1149 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 WHAMMQ8TF30 809 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 RPS6KC1Q96S38 1066 aa10.67□□□□□ -0.7
CDRT1-204ENST00000395906 TAF1DQ9H5J8 278 aaPredicted RBP10.67□□□□□ -0.7
CDRT1-204ENST00000395906 ENC1O14682 589 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 SRGAP2O75044 1071 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 GFPT2O94808 682 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 BAG3O95817 575 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 PAEPP09466 180 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 CCT4P50991 539 aaKnown RBP10.66□□□□□ -0.7
CDRT1-204ENST00000395906 C2orf54Q08AI8 447 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 OR52E8Q6IFG1 317 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 CPLX4Q7Z7G2 160 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 CNGA4Q8IV77 575 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 MYOCDQ8IZQ8 938 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 CCDC197Q8NCU1 140 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 LINS1Q8NG48 757 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 KLHDC4Q8TBB5 520 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 NOC3LQ8WTT2 800 aaKnown RBP10.66□□□□□ -0.7
CDRT1-204ENST00000395906 CCDC43Q96MW1 224 aaKnown RBP10.66□□□□□ -0.7
CDRT1-204ENST00000395906 SLF1Q9BQI6 1058 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 LLPHQ9BRT6 129 aaKnown RBP10.66□□□□□ -0.7
CDRT1-204ENST00000395906 TRAIPQ9BWF2 469 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 OXCT2Q9BYC2 517 aaPredicted RBP10.66□□□□□ -0.7
CDRT1-204ENST00000395906 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 RHBDL2Q9NX52 303 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 ITGB1BP2Q9UKP3 347 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 SLC4A7Q9Y6M7 1214 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 A0A1B0GTH6 734 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 PI4KAP2A4QPH2 592 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 E7ENQ6 273 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 SLC27A2O14975 620 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 PDHA1P08559 390 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 IDO1P14902 403 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 RFC5P40937 340 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms