RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MORC2Q9Y6X9 1032 aaPredicted RBP23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 ATP2A1O14983 1001 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 CETPP11597 493 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 OSBPP22059 807 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 CCAR1Q8IX12 1150 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 SMC1BQ8NDV3 1235 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 TRERF1Q96PN7 1200 aa23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 P2RX7Q99572 595 aaKnown RBP23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 ASCC2Q9H1I8 757 aaPredicted RBP23.24■■□□□ 1.31
VCPKMT-202ENST00000395860 A0A1W2PQ27 194 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 A0A1W2PQ64 194 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 A0A1W2PQD8 194 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 CUTAO60888 179 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 ZBTB48P10074 688 aaPredicted RBP23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 ATP2C1P98194 919 aaPredicted RBP23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 PLS1Q14651 629 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 AXDND1Q5T1B0 1012 aaPredicted RBP23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 SPRYD7Q5W111 196 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 GPAT2Q6NUI2 795 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 CAVIN1Q6NZI2 390 aaKnown RBP23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 CLEC4DQ8WXI8 215 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 TEX13BQ9BXU2 312 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 MRVI1Q9Y6F6 885 aa23.23■■□□□ 1.31
VCPKMT-202ENST00000395860 NFIBO00712 420 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 MUM1L1Q5H9M0 696 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 FCHSD1Q86WN1 690 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 MB21D1Q8N884 522 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 ANP32EQ9BTT0 268 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 FBXO2Q9UK22 296 aaPredicted RBP23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 PTPREP23469 700 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 ORC2Q13416 577 aaPredicted RBP23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 LBX2Q6XYB7 198 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 MRPS27Q92552 414 aaKnown RBP23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 MS4A4AQ96JQ5 239 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 CLIC6Q96NY7 704 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 RNF146Q9NTX7 359 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 RIPK3Q9Y572 518 aa23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 SRPRBQ9Y5M8 271 aaKnown RBP23.22■■□□□ 1.31
VCPKMT-202ENST00000395860 CCL15-CCL14A0A0B4J2E2 113 aa23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 LIG1P18858 919 aa23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 STAT3P40763 770 aa23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 HSD17B4P51659 736 aa23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 HERVK_113P62684 666 aa23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 CCL15Q16663 113 aa23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 FSIP1Q8NA03 581 aa23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 SYAP1Q96A49 352 aaPredicted RBP23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 FERMT2Q96AC1 680 aa23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 NAP1L4Q99733 375 aaKnown RBP23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 GZF1Q9H116 711 aaPredicted RBP23.21■■□□□ 1.31
VCPKMT-202ENST00000395860 USP11P51784 963 aa23.2■■□□□ 1.3
VCPKMT-202ENST00000395860 TKFCQ3LXA3 575 aa23.2■■□□□ 1.3
VCPKMT-202ENST00000395860 CCDC73Q6ZRK6 1079 aa23.2■■□□□ 1.3
VCPKMT-202ENST00000395860 SAMD3Q8N6K7 520 aa23.2■■□□□ 1.3
VCPKMT-202ENST00000395860 C4orf32Q8N8J7 132 aa23.2■■□□□ 1.3
VCPKMT-202ENST00000395860 EHMT1Q9H9B1 1298 aa23.2■■□□□ 1.3
VCPKMT-202ENST00000395860 MAP3K20Q9NYL2 800 aaKnown RBP23.2■■□□□ 1.3
VCPKMT-202ENST00000395860 LAD1O00515 517 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 NEMFO60524 1076 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 CMA1P23946 247 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 SREBF1P36956 1147 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 ZNF157P51786 506 aaPredicted RBP23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 ARL6IP4Q66PJ3 421 aaKnown RBP23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 PNMA3Q9UL41 463 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 EDIL3O43854 480 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 TDP2O95551 362 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 ARHGAP4P98171 946 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 GHRHRQ02643 423 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 PPP4R3AQ6IN85 833 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 SAPCD2Q86UD0 394 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 GOLPH3LQ9H4A5 285 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 TMEM63CQ9P1W3 806 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 BTBD7Q9P203 1132 aa23.19■■□□□ 1.3
VCPKMT-202ENST00000395860 A0A1B0GVL5 298 aa23.18■■□□□ 1.3
VCPKMT-202ENST00000395860 GCFC2P16383 781 aaKnown RBP23.18■■□□□ 1.3
VCPKMT-202ENST00000395860 GRIN1Q05586 938 aa23.18■■□□□ 1.3
VCPKMT-202ENST00000395860 SHC4Q6S5L8 630 aa23.18■■□□□ 1.3
VCPKMT-202ENST00000395860 POTEEQ6S8J3 1075 aa23.18■■□□□ 1.3
VCPKMT-202ENST00000395860 ZNF579Q8NAF0 562 aaKnown RBP23.18■■□□□ 1.3
VCPKMT-202ENST00000395860 PAGR1Q9BTK6 254 aa23.18■■□□□ 1.3
VCPKMT-202ENST00000395860 TMEM60Q9H2L4 133 aa23.18■■□□□ 1.3
VCPKMT-202ENST00000395860 VWA3AA6NCI4 1184 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 NSMFQ6X4W1 530 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 RNF207Q6ZRF8 634 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 RASAL3Q86YV0 1011 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 CRYGNQ8WXF5 182 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 BRI3BPQ8WY22 251 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 ACAD9Q9H845 621 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 SLC45A1Q9Y2W3 748 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 BTBD19C9JJ37 291 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 PDHXO00330 501 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 NR1I2O75469 434 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 OR52Z1P0C646 297 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 RPS6P62753 249 aaKnown RBP23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 RESP18Q5W5W9 173 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 RGMBQ6NW40 437 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 ANKRD23Q86SG2 305 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 POTEDQ86YR6 584 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 CSRNP2Q9H175 543 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 DACT1Q9NYF0 836 aa23.17■■□□□ 1.3
VCPKMT-202ENST00000395860 DDX25Q9UHL0 483 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms