RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 ATP4AP20648 1035 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 GMPSP49915 693 aaPredicted RBP10.69□□□□□ -0.7
PFDN6-205ENST00000395134 TCIRG1Q13488 830 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 HSP90AB3PQ58FF7 597 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 DPP8Q6V1X1 898 aaPredicted RBP10.69□□□□□ -0.7
PFDN6-205ENST00000395134 DDX46Q7L014 1031 aaKnown RBP10.69□□□□□ -0.7
PFDN6-205ENST00000395134 PNMA8AQ86V59 439 aaPredicted RBP10.69□□□□□ -0.7
PFDN6-205ENST00000395134 LRRC47Q8N1G4 583 aaKnown RBP10.69□□□□□ -0.7
PFDN6-205ENST00000395134 OR13H1Q8NG92 308 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 CNTNAP3BQ96NU0 1288 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 GPR101Q96P66 508 aaPredicted RBP10.69□□□□□ -0.7
PFDN6-205ENST00000395134 OSMRQ99650 979 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 RUSC1Q9BVN2 902 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 CNTNAP3Q9BZ76 1288 aa10.69□□□□□ -0.7
PFDN6-205ENST00000395134 AVENQ9NQS1 362 aaPredicted RBP10.69□□□□□ -0.7
PFDN6-205ENST00000395134 PSME4Q14997 1843 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 UPK3BL1B0FP48 263 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 UPK3BL2E5RIL1 263 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 MAFGO15525 162 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 EYA4O95677 639 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 RNF144AP50876 292 aaPredicted RBP10.68□□□□□ -0.7
PFDN6-205ENST00000395134 RPS26P11Q5JNZ5 115 aaPredicted RBP10.68□□□□□ -0.7
PFDN6-205ENST00000395134 SLC10A5Q5PT55 438 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 DUSP27Q5VZP5 1158 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 KCTD12Q96CX2 325 aaKnown RBP10.68□□□□□ -0.7
PFDN6-205ENST00000395134 FAM89AQ96GI7 184 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 MBIPQ9NS73 344 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 BABAM1Q9NWV8 329 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 PCDHB14Q9Y5E9 798 aa10.68□□□□□ -0.7
PFDN6-205ENST00000395134 TNRC18O15417 2968 aaPredicted RBP10.68□□□□□ -0.7
PFDN6-205ENST00000395134 THSD7BQ9C0I4 1608 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 AKAP11Q9UKA4 1901 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 DNAJC25-GNG10A0A024R161 153 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 SPATA31C2B4DYI2 1134 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 ELL2O00472 640 aaPredicted RBP10.67□□□□□ -0.7
PFDN6-205ENST00000395134 PLD2O14939 933 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 ATE1O95260 518 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 CXCL9Q07325 125 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 NNTQ13423 1086 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 GRAPQ13588 217 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 SPRED3Q2MJR0 410 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 FNDC3BQ53EP0 1204 aaKnown RBP10.67□□□□□ -0.7
PFDN6-205ENST00000395134 ARSJQ5FYB0 599 aaPredicted RBP10.67□□□□□ -0.7
PFDN6-205ENST00000395134 NECAB2Q7Z6G3 386 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 SVIPQ8NHG7 77 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 GRAPLQ8TC17 118 aaPredicted RBP10.67□□□□□ -0.7
PFDN6-205ENST00000395134 NCOA5Q9HCD5 579 aaKnown RBP10.67□□□□□ -0.7
PFDN6-205ENST00000395134 ENAMQ9NRM1 1142 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 GPN3Q9UHW5 284 aaPredicted RBP10.67□□□□□ -0.7
PFDN6-205ENST00000395134 CYP8B1Q9UNU6 501 aa10.67□□□□□ -0.7
PFDN6-205ENST00000395134 CACNA1FO60840 1977 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 APAF1O14727 1248 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 SASH3O75995 380 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 FAAP100Q0VG06 881 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 KSR2Q6VAB6 950 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 PLBD2Q8NHP8 589 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 CELF1Q92879 486 aaKnown RBP10.66□□□□□ -0.7
PFDN6-205ENST00000395134 TM9SF2Q99805 663 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 TARS2Q9BW92 718 aaKnown RBP10.66□□□□□ -0.7
PFDN6-205ENST00000395134 GLIS2Q9BZE0 524 aaPredicted RBP10.66□□□□□ -0.7
PFDN6-205ENST00000395134 CDH19Q9H159 772 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 GPRC5DQ9NZD1 345 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 SAMM50Q9Y512 469 aa10.66□□□□□ -0.7
PFDN6-205ENST00000395134 WDR33Q9C0J8 1336 aaKnown RBP10.65□□□□□ -0.7
PFDN6-205ENST00000395134 E2F8A0AVK6 867 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 RASSF10A6NK89 507 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 YDJCA8MPS7 323 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 MMP20O60882 483 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 GUCY2CP25092 1073 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 CDC27P30260 824 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 LBX1P52954 281 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 NCAPHQ15003 741 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 DEFB115Q30KQ5 88 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 CIAPIN1Q6FI81 312 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 CYP4F22Q6NT55 531 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 STRA8Q7Z7C7 330 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 SP8Q8IXZ3 490 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 KISS1RQ969F8 398 aaPredicted RBP10.65□□□□□ -0.7
PFDN6-205ENST00000395134 ITPKCQ96DU7 683 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 ISCA1Q9BUE6 129 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 EPN3Q9H201 632 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 PRKRIP1Q9H875 184 aaPredicted RBP10.65□□□□□ -0.7
PFDN6-205ENST00000395134 DBNDD1Q9H9R9 158 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 ADARB2Q9NS39 739 aaKnown RBP10.65□□□□□ -0.7
PFDN6-205ENST00000395134 DBF4Q9UBU7 674 aaPredicted RBP10.65□□□□□ -0.7
PFDN6-205ENST00000395134 SLC12A7Q9Y666 1083 aa10.65□□□□□ -0.7
PFDN6-205ENST00000395134 BBOX1O75936 387 aa10.64□□□□□ -0.71
PFDN6-205ENST00000395134 CELF2O95319 508 aaKnown RBP10.64□□□□□ -0.71
PFDN6-205ENST00000395134 BMP6P22004 513 aa10.64□□□□□ -0.71
PFDN6-205ENST00000395134 CCNFP41002 786 aa10.64□□□□□ -0.71
PFDN6-205ENST00000395134 CTCFP49711 727 aaPredicted RBP10.64□□□□□ -0.71
PFDN6-205ENST00000395134 GPSM2P81274 684 aa10.64□□□□□ -0.71
PFDN6-205ENST00000395134 KIAA2012Q0VF49 1180 aa10.64□□□□□ -0.71
PFDN6-205ENST00000395134 PIN1Q13526 163 aaPredicted RBP10.64□□□□□ -0.71
PFDN6-205ENST00000395134 MTMR1Q13613 665 aa10.64□□□□□ -0.71
PFDN6-205ENST00000395134 LRRFIP1Q32MZ4 808 aaKnown RBP10.64□□□□□ -0.71
PFDN6-205ENST00000395134 RASIP1Q5U651 963 aa10.64□□□□□ -0.71
PFDN6-205ENST00000395134 SLC4A10Q6U841 1118 aa10.64□□□□□ -0.71
PFDN6-205ENST00000395134 DLK2Q6UY11 383 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms