RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 HSD17B4P51659 736 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 ATN1P54259 1190 aaPredicted RBP7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 KIFC2Q96AC6 838 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 TMEM47Q9BQJ4 181 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 PRDM6Q9NQX0 595 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 WDR81Q562E7 1941 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 MINDY4BA8MYZ0 360 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 COL19A1Q14993 1142 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 AFAP1L1Q8TED9 768 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 WNT8AQ9H1J5 351 aa7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 ALDH8A1Q9H2A2 487 aaPredicted RBP7.34□□□□□ -1.23
SMARCAD1-203ENST00000394961 HSPD1P10809 573 aaKnown RBP7.34□□□□□ -1.24
SMARCAD1-203ENST00000394961 MUM1L1Q5H9M0 696 aa7.34□□□□□ -1.24
SMARCAD1-203ENST00000394961 MCF2L2Q86YR7 1114 aa7.34□□□□□ -1.24
SMARCAD1-203ENST00000394961 SCFD2Q8WU76 684 aa7.34□□□□□ -1.24
SMARCAD1-203ENST00000394961 ZNF576Q9H609 170 aa7.34□□□□□ -1.24
SMARCAD1-203ENST00000394961 ZHX1Q9UKY1 873 aaPredicted RBP7.34□□□□□ -1.24
SMARCAD1-203ENST00000394961 FGBP02675 491 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 PBX4Q9BYU1 374 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 MSRAQ9UJ68 235 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 CCPG1Q9ULG6 757 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 TSPY2A6NKD2 308 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 FOSL2P15408 326 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 CNTN2Q02246 1040 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 NUCB1Q02818 461 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 RPAINQ86UA6 219 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 CNNM2Q9H8M5 875 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 B4GALT4O60513 344 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 FGAP02671 866 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 C6orf222P0C671 652 aaPredicted RBP7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 GNASQ5JWF2 1037 aa7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 SP7Q8TDD2 431 aaPredicted RBP7.33□□□□□ -1.24
SMARCAD1-203ENST00000394961 PQBP1O60828 265 aaKnown RBP7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 RPLP2P05387 115 aaKnown RBP7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 ACTN1P12814 892 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 ICAM3P32942 547 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 BFSP2Q13515 415 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 BRDTQ58F21 947 aaPredicted RBP7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 XRRA1Q6P2D8 792 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 ESR2Q92731 530 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 SAMD11Q96NU1 681 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 KATNAL1Q9BW62 490 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 HIPK3Q9H422 1215 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 PRDM5Q9NQX1 630 aaPredicted RBP7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 COG5Q9UP83 839 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 TRIM71Q2Q1W2 868 aaKnown RBP7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 SEC62Q99442 399 aaKnown RBP7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 TGFB3P10600 412 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 FAM26DQ5JW98 314 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 MYLIPQ8WY64 445 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 FERMT2Q96AC1 680 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 GAS2L1Q99501 681 aaPredicted RBP7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 KRT23Q9C075 422 aa7.32□□□□□ -1.24
SMARCAD1-203ENST00000394961 A0A0D9SFI3 127 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 TNFRSF10AO00220 468 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 SDSP20132 328 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 PTK7Q13308 1070 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 GRIN2CQ14957 1233 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 TRAF7Q6Q0C0 670 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 RNF207Q6ZRF8 634 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 ZNF365Q70YC5 407 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 PPTC7Q8NI37 304 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 ASB2Q96Q27 587 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 CTAGE1Q96RT6 745 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 CTNNA3Q9UI47 895 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 ARHGAP1Q07960 439 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 TTLL4Q14679 1199 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 SEC23AQ15436 765 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 WDR11Q9BZH6 1224 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 THEGQ9P2T0 379 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 MRPL11Q9Y3B7 192 aaKnown RBP7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 F2P00734 622 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 GH1P01241 217 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 IQCF3P0C7M6 154 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 CSF2RAP15509 400 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 MCCP23508 829 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 BAATQ14032 418 aaPredicted RBP7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 CNKSR3Q6P9H4 555 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 MFSD6Q6ZSS7 791 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 STOX1Q6ZVD7 989 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 LENG1Q96BZ8 264 aaPredicted RBP7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 RIOX1Q9H6W3 641 aa7.31□□□□□ -1.24
SMARCAD1-203ENST00000394961 DOCK5Q9H7D0 1870 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 EMSYQ7Z589 1322 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 MMP3P08254 477 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 ALAS1P13196 640 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 MRPS5P82675 430 aaKnown RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 CTDSPL2Q05D32 466 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 PPP2R5BQ15173 497 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 AAK1Q2M2I8 961 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 ANO1Q5XXA6 986 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 SLC30A10Q6XR72 485 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 PLEKHM2Q8IWE5 1019 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 CPXCR1Q8N123 301 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 KCNH6Q9H252 994 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 TSPYL2Q9H2G4 693 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 RWDD1Q9H446 243 aaPredicted RBP7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 ABHD14A-ACY1A0A1B0GW23 586 aa7.3□□□□□ -1.24
SMARCAD1-203ENST00000394961 PALM3A6NDB9 673 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms