RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 TMTC1Q8IUR5 882 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 ZNF507Q8TCN5 953 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 PIGSQ96S52 555 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 EPN1Q9Y6I3 576 aaPredicted RBP15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 NDUFA10O95299 355 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 VSNL1P62760 191 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 MCM6Q14566 821 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 ANKS1AQ92625 1134 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 MASTLQ96GX5 879 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 ABCB6Q9NP58 842 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 KBTBD4Q9NVX7 518 aa15.12■□□□□ 0.01
GTF2F1-201ENST00000394456 USP17L5A8MUK1 530 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 LGALS16A8MUM7 142 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 CYP27A1Q02318 531 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 CABP7Q86V35 215 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 CERS3Q8IU89 383 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 MMTAG2Q9BU76 263 aaKnown RBP15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 LACRTQ9GZZ8 138 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 DDX4Q9NQI0 724 aaKnown RBP15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 SMCO2A6NFE2 343 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 TPM1P09493 284 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 RXRBP28702 533 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 GLIS3Q8NEA6 775 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 CEP95Q96GE4 821 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 TRERF1Q96PN7 1200 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 NAPGQ99747 312 aaPredicted RBP15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 ZNF287Q9HBT7 754 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 TCP11L1Q9NUJ3 509 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 RMND1Q9NWS8 449 aa15.11■□□□□ 0.01
GTF2F1-201ENST00000394456 H7C1D1 291 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 ATP1A1P05023 1023 aaKnown RBP15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 PLEKP08567 350 aaPredicted RBP15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 C2CD5Q86YS7 1000 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 CSGALNACT2Q8N6G5 542 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 GIMAP8Q8ND71 665 aaPredicted RBP15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 COA7Q96BR5 231 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 TMX4Q9H1E5 349 aaPredicted RBP15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 SRCAPQ6ZRS2 3230 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 EPHB6O15197 1021 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 EDIL3O43854 480 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 CYP2C19P33261 490 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 ASIC1P78348 528 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 AMPD2Q01433 879 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 ATP2B2Q01814 1243 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 PDE4DQ08499 809 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 FLAD1Q8NFF5 587 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 CCDC51Q96ER9 411 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 CAPZA3Q96KX2 299 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 NUDT12Q9BQG2 462 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 SLC39A2Q9NP94 309 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 SH3GLB2Q9NR46 395 aa15.1■□□□□ 0.01
GTF2F1-201ENST00000394456 RHOBTB3O94955 611 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 CHRNA5P30532 468 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 TXKP42681 527 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 BEND6Q5SZJ8 279 aaPredicted RBP15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 NEDD1Q8NHV4 660 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 TBCKQ8TEA7 893 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 SMCR8Q8TEV9 937 aaPredicted RBP15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 TUBGCP2Q9BSJ2 902 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 TRIM9Q9C026 710 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 PDE11AQ9HCR9 933 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 LUC7L2Q9Y383 392 aaKnown RBP15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 TNS1Q9HBL0 1735 aaKnown RBP15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 SCN9AQ15858 1988 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 ZMYND10O75800 440 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 SPAG1Q07617 926 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 DYMQ7RTS9 669 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 KRT26Q7Z3Y9 468 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 LRRC47Q8N1G4 583 aaKnown RBP15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 KIAA0895Q8NCT3 520 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 ANKRD20A12PQ8NF67 263 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 OR8K1Q8NGG5 319 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 USP40Q9NVE5 1235 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 PCDHAC2Q9Y5I4 1007 aa15.09■□□□□ 0.01
GTF2F1-201ENST00000394456 ZNF185O15231 689 aa15.08■□□□□ 0.01
GTF2F1-201ENST00000394456 SLC37A4O43826 429 aa15.08■□□□□ 0.01
GTF2F1-201ENST00000394456 OR52Z1P0C646 297 aa15.08■□□□□ 0.01
GTF2F1-201ENST00000394456 HMGB2P26583 209 aaKnown RBP15.08■□□□□ 0.01
GTF2F1-201ENST00000394456 CNOT6LQ96LI5 555 aaKnown RBP15.08■□□□□ 0.01
GTF2F1-201ENST00000394456 GDAP1L1Q96MZ0 367 aa15.08■□□□□ 0.01
GTF2F1-201ENST00000394456 CCSER1Q9C0I3 900 aa15.08■□□□□ 0.01
GTF2F1-201ENST00000394456 TDP2O95551 362 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 MRPS25P82663 173 aaKnown RBP15.08■□□□□ 0
GTF2F1-201ENST00000394456 MMS19Q96T76 1030 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 ZMYND12Q9H0C1 365 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 SEMA6BQ9H3T3 888 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 MYO6Q9UM54 1294 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 PSMA7O14818 248 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 GNAQP50148 359 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 MIIPQ5JXC2 388 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 KIAA0825Q8IV33 1275 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 DAGLBQ8NCG7 672 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 PCMTD1Q96MG8 357 aaPredicted RBP15.08■□□□□ 0
GTF2F1-201ENST00000394456 DNAJC7Q99615 494 aa15.08■□□□□ 0
GTF2F1-201ENST00000394456 QSER1Q2KHR3 1735 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 CCDC151A5D8V7 595 aa15.07■□□□□ 0
GTF2F1-201ENST00000394456 POTEMA6NI47 508 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms