RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 GJA8P48165 433 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CLCN6P51797 869 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ARF3P61204 181 aaPredicted RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 YWHAGP61981 247 aaKnown RBP eCLIP3.55□□□□□ -1.84
PHF3-202ENST00000393387 PSMC6P62333 389 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ARF1P84077 181 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 IL9RQ01113 521 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 GUCY1A3Q02108 690 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 TRAF1Q13077 416 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 MAPK11Q15759 364 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CNGA2Q16280 664 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ISLR2Q6UXK2 745 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 STXBP4Q6ZWJ1 553 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CATIPQ7Z7H3 387 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 DENND6AQ8IWF6 608 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 GALNT4Q8N4A0 578 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 FBXO18Q8NFZ0 1043 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ZNF507Q8TCN5 953 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 SLC26A7Q8TE54 656 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CNBD2Q96M20 576 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 TBC1D32Q96NH3 1257 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 SRCIN1Q9C0H9 1055 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 BLZF1Q9H2G9 400 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CABP2Q9NPB3 220 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 HOMER3Q9NSC5 361 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 ZNF219Q9P2Y4 722 aaPredicted RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 ATP8A1Q9Y2Q0 1164 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 SYNRGQ9UMZ2 1314 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ZC3H4Q9UPT8 1303 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 B4DLN1 442 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 LGR5O75473 907 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 PARP1P09874 1014 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 MYCLP12524 364 aaPredicted RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 PLS3P13797 630 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CPA1P15085 419 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ATP6V1B1P15313 513 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CXCR5P32302 372 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 EIF2S3P41091 472 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 ADCY7P51828 1080 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ARHGAP4P98171 946 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 KIF19Q2TAC6 998 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 RNF207Q6ZRF8 634 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 HORMAD1Q86X24 394 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 U2AF1L4Q8WU68 220 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 CYGBQ8WWM9 190 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 LPIN2Q92539 896 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 PHKBQ93100 1093 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 NMD3Q96D46 503 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 MTERF3Q96E29 417 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 GID8Q9NWU2 228 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 RABL2AQ9UBK7 228 aaPredicted RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 FNDC3AQ9Y2H6 1198 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 PDS5BQ9NTI5 1447 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 SYNJ2BP-COX16A0A087WUM0 186 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 A6NNZ2 444 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 PI4K2BG5E9Z4 385 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 SASH1O94885 1247 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CDC25CP30307 473 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CCT3P49368 545 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 MAPK10P53779 464 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 BIRC3Q13489 604 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CAPRIN1Q14444 709 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 TERF2Q15554 542 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 TUBB8Q3ZCM7 444 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 LGSNQ5TDP6 509 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ATG16L1Q676U5 607 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 RCSD1Q6JBY9 416 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 IFNEQ86WN2 208 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 CSGALNACT2Q8N6G5 542 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 TEX19Q8NA77 164 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 TRIM63Q969Q1 353 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 HOOK2Q96ED9 719 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 NAP1L4Q99733 375 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 RPAP3Q9H6T3 665 aaPredicted RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 PARVAQ9NVD7 372 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 DDX56Q9NY93 547 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 USE1Q9NZ43 259 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 COX16Q9P0S2 106 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 NRBP1Q9UHY1 535 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 DAPK2Q9UIK4 370 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 SAR1BQ9Y6B6 198 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 BRD4O60885 1362 aaPredicted RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 A0A1B0GW55 424 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 SPTLC2O15270 562 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 GYG2O15488 501 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 TNFRSF21O75509 655 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 IFIT1P09914 478 aaKnown RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 OCM2P0CE71 109 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 OCMP0CE72 109 aaPredicted RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 DUX4L2P0CJ85 424 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 DUX4L3P0CJ86 424 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 DUX4L4P0CJ87 422 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 DUX4L5P0CJ88 424 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 DUX4L6P0CJ89 424 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 DUX4L7P0CJ90 424 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 ATF7P17544 494 aaPredicted RBP3.55□□□□□ -1.84
PHF3-202ENST00000393387 KCTD2Q14681 263 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 KRT72Q14CN4 511 aa3.55□□□□□ -1.84
PHF3-202ENST00000393387 WTAPQ15007 396 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms