RNA–Protein interactions for RNA: ENST00000392963.5

NBPF1-201, Transcript of NBPF member 1, humanhuman

TSL 5

Gene NBPF1, Length 2,672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1-201ENST00000392963 SHISA4Q96DD7 197 aa8.6□□□□□ -1.03
NBPF1-201ENST00000392963 RPAP3Q9H6T3 665 aaPredicted RBP8.6□□□□□ -1.03
NBPF1-201ENST00000392963 KCND1Q9NSA2 647 aa8.6□□□□□ -1.03
NBPF1-201ENST00000392963 AFG3L2Q9Y4W6 797 aa8.6□□□□□ -1.03
NBPF1-201ENST00000392963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.6□□□□□ -1.03
NBPF1-201ENST00000392963 PPP2R3BQ9Y5P8 575 aa8.6□□□□□ -1.03
NBPF1-201ENST00000392963 V9GY48 417 aaPredicted RBP8.6□□□□□ -1.03
NBPF1-201ENST00000392963 KLRF2D3W0D1 207 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 KIF2AO00139 706 aaPredicted RBP8.59□□□□□ -1.03
NBPF1-201ENST00000392963 RPS6KA5O75582 802 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 TOP1P11387 765 aaKnown RBP8.59□□□□□ -1.03
NBPF1-201ENST00000392963 CDC25BP30305 580 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 RTN1Q16799 776 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 FERMT3Q86UX7 667 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 CCDC17Q96LX7 622 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 PIGSQ96S52 555 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 COL2A1P02458 1487 aaPredicted RBP8.59□□□□□ -1.03
NBPF1-201ENST00000392963 PTPDC1A2A3K4 754 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 CPLX1O14810 134 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 FIBPO43427 364 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 FLOT1O75955 427 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 SKILP12757 684 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 GJB2P29033 226 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 BACE1P56817 501 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 CCZ1BP86790 482 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 CCZ1P86791 482 aaPredicted RBP8.59□□□□□ -1.03
NBPF1-201ENST00000392963 PLS1Q14651 629 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 MAP9Q49MG5 647 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 COA7Q96BR5 231 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 CCDC34Q96HJ3 373 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 PTPN18Q99952 460 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 AGXT2Q9BYV1 514 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 KCNJ14Q9UNX9 436 aa8.59□□□□□ -1.03
NBPF1-201ENST00000392963 LAMA3Q16787 3333 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 ANKRD65E5RJM6 399 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 NEMFO60524 1076 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 PARP1P09874 1014 aaKnown RBP8.58□□□□□ -1.04
NBPF1-201ENST00000392963 ZSCAN22P10073 491 aaPredicted RBP8.58□□□□□ -1.04
NBPF1-201ENST00000392963 FDPSP14324 419 aaKnown RBP8.58□□□□□ -1.04
NBPF1-201ENST00000392963 LIFRP42702 1097 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 PPP2R5AQ15172 486 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 FAM173BQ6P4H8 233 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 LEKR1Q6ZMV7 388 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 RPAINQ86UA6 219 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 SGMS1Q86VZ5 419 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 DGKHQ86XP1 1220 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 PGBD1Q96JS3 809 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 PURBQ96QR8 312 aaKnown RBP8.58□□□□□ -1.04
NBPF1-201ENST00000392963 PAGR1Q9BTK6 254 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 TMX2Q9Y320 296 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 TMEM88BA6NKF7 163 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 H3BQF6 201 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 C11orf91Q3C1V1 193 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 ANO6Q4KMQ2 910 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 LDLRAD1Q5T700 205 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 CC2D1AQ6P1N0 951 aaPredicted RBP8.58□□□□□ -1.04
NBPF1-201ENST00000392963 ADGRF4Q8IZF3 695 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 NSUN7Q8NE18 718 aaKnown RBP8.58□□□□□ -1.04
NBPF1-201ENST00000392963 CTCFLQ8NI51 663 aaPredicted RBP8.58□□□□□ -1.04
NBPF1-201ENST00000392963 ATG4CQ96DT6 458 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 IL17RAQ96F46 866 aa8.58□□□□□ -1.04
NBPF1-201ENST00000392963 CCL15-CCL14A0A0B4J2E2 113 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 PFKFB2O60825 505 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 PPP1R11O60927 126 aaPredicted RBP8.57□□□□□ -1.04
NBPF1-201ENST00000392963 NTRK3Q16288 839 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 CCL15Q16663 113 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 TYW1BQ6NUM6 668 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 RASAL3Q86YV0 1011 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 RASGRP4Q8TDF6 673 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 BRI3BPQ8WY22 251 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 AGBL1Q96MI9 1066 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 VCPKMTQ9H867 229 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 TCP11L1Q9NUJ3 509 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 NYAP2Q9P242 653 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 PLIN4Q96Q06 1357 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 DOCK3Q8IZD9 2030 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 ZSWIM8A7E2V4 1837 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 SPDYE5A6NIY4 337 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 IGF2BP3O00425 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
NBPF1-201ENST00000392963 BMP3P12645 472 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 ZNF543Q08ER8 600 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
NBPF1-201ENST00000392963 MAP3K11Q16584 847 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 HEATR3Q7Z4Q2 680 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 ERO1BQ86YB8 467 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 UBXN4Q92575 508 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 TBC1D5Q92609 795 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 RAVER2Q9HCJ3 691 aaKnown RBP8.57□□□□□ -1.04
NBPF1-201ENST00000392963 VPS37CA5D8V6 355 aaPredicted RBP8.57□□□□□ -1.04
NBPF1-201ENST00000392963 TULP1O00294 542 aaPredicted RBP8.57□□□□□ -1.04
NBPF1-201ENST00000392963 PCP11498 1178 aaKnown RBP8.57□□□□□ -1.04
NBPF1-201ENST00000392963 RGMBQ6NW40 437 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 EFCAB13Q8IY85 973 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 RBM46Q8TBY0 533 aaKnown RBP8.57□□□□□ -1.04
NBPF1-201ENST00000392963 MS4A4AQ96JQ5 239 aa8.57□□□□□ -1.04
NBPF1-201ENST00000392963 P2RX7Q99572 595 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms