RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 WASF3Q9UPY6 502 aa3.32□□□□□ -1.88
SNORA40.19-201ENST00000390846 CADPSQ9ULU8 1353 aa3.32□□□□□ -1.88
SNORA40.19-201ENST00000390846 A0A087WZG4 1122 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 SSU72P8A0A1W2PR75 194 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 PATL2C9JE40 543 aaKnown RBP3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 C1QTNF3-AMACRE9PGA6 284 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 F8W031 263 aaPredicted RBP3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 AURKAO14965 403 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 SMARCA5O60264 1052 aaPredicted RBP3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 CAPNS1P04632 268 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 TP53P04637 393 aaPredicted RBP3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 C8BP07358 591 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 ARL4AP40617 200 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 MAGEA10P43363 369 aaPredicted RBP3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 PLP2Q04941 152 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 HLA-DQA1Q5Y7H0 255 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 RCSD1Q6JBY9 416 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 DHX37Q8IY37 1157 aaKnown RBP3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 PLEKHO2Q8TD55 490 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 CPA5Q8WXQ8 436 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 CNOT11Q9UKZ1 510 aaKnown RBP3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 MYRFQ9Y2G1 1151 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 SIT1Q9Y3P8 196 aa3.31□□□□□ -1.88
SNORA40.19-201ENST00000390846 VAMP4O75379 141 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 MCM4P33991 863 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 MLECQ14165 292 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 TBC1D10BQ4KMP7 808 aaPredicted RBP3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 HS2ST1Q7LGA3 356 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 METTL16Q86W50 562 aaKnown RBP3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 ARHGEF39Q8N4T4 335 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 TM9SF2Q99805 663 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 GORASP1Q9BQQ3 440 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 SPON2Q9BUD6 331 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 BACH2Q9BYV9 841 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 PCDHGB7Q9Y5F8 929 aa3.3□□□□□ -1.88
SNORA40.19-201ENST00000390846 C7orf72A4D263 438 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 HMGB1P09429 215 aaKnown RBP3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 NCAM1P13591 858 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 TCF3P15923 654 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 ENDOUP21128 410 aaKnown RBP3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 GUCY2CP25092 1073 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 L1CAMP32004 1257 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 POU4F1Q01851 419 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 CACNB2Q08289 660 aaPredicted RBP3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 OLFML2BQ68BL8 750 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 CYP2R1Q6VVX0 501 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 ZNF662Q6ZS27 426 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 KIAA0825Q8IV33 1275 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 CCDC144CPQ8IYA2 1237 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 FAM26EQ8N5C1 309 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 SMARCC2Q8TAQ2 1214 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 GIPC2Q8TF65 315 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 DDX1Q92499 740 aaKnown RBP3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 COPS5Q92905 334 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 MBD6Q96DN6 1003 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 NOL6Q9H6R4 1146 aaKnown RBP3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 FAM86C1Q9NVL1 165 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 DDX41Q9UJV9 622 aaKnown RBP3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 PCDHB10Q9UN67 800 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 PMF1-BGLAPU3KQ54 211 aa3.29□□□□□ -1.88
SNORA40.19-201ENST00000390846 A0A1W2PQH9 124 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 SGSM2O43147 1006 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 PFKLP17858 780 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 ERCC3P19447 782 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 CNR2P34972 360 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 SOX9P48436 509 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 GIPRP48546 466 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 TMEM62Q0P6H9 643 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 PUM1Q14671 1186 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 TARBP2Q15633 366 aaKnown RBP3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 INF2Q27J81 1249 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 BICRALQ6AI39 1079 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 GIMAP6Q6P9H5 292 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 SMARCC1Q92922 1105 aaPredicted RBP3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 DHRS1Q96LJ7 313 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 WWC2-AS2Q96NR7 200 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 HAUS7Q99871 368 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 LGR4Q9BXB1 951 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 CD248Q9HCU0 757 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 MRS2Q9HD23 443 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 GINM1Q9NU53 330 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 APEX2Q9UBZ4 518 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 RWDD3Q9Y3V2 267 aa3.28□□□□□ -1.88
SNORA40.19-201ENST00000390846 RECKO95980 971 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 EPHX1P07099 455 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 CD3EP07766 207 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 ZNF20P17024 532 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 THBS2P35442 1172 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 CPNE8Q86YQ8 564 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 MIB1Q86YT6 1006 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 FAM169BQ8N8A8 192 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 ADAMTS17Q8TE56 1095 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 DDX11Q96FC9 970 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 SPATA32Q96LK8 384 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 ZDHHC15Q96MV8 337 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 C11orf84Q9BUA3 381 aaPredicted RBP3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 DSCC1Q9BVC3 393 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 BCL2L13Q9BXK5 485 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 GULP1Q9UBP9 304 aa3.27□□□□□ -1.89
SNORA40.19-201ENST00000390846 CGGBP1Q9UFW8 167 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms