RNA–Protein interactions for RNA: ENST00000390652.9

BCAS3-201, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-201ENST00000390652 RAB34Q9BZG1 259 aa12.34□□□□□ -0.43
BCAS3-201ENST00000390652 OSBPL5Q9H0X9 879 aaPredicted RBP12.34□□□□□ -0.43
BCAS3-201ENST00000390652 INTS13Q9NVM9 706 aa12.34□□□□□ -0.43
BCAS3-201ENST00000390652 ZNHIT6Q9NWK9 470 aaKnown RBP12.34□□□□□ -0.43
BCAS3-201ENST00000390652 KIF5CO60282 957 aa12.33□□□□□ -0.43
BCAS3-201ENST00000390652 FXR1P51114 621 aaKnown RBP eCLIP12.33□□□□□ -0.43
BCAS3-201ENST00000390652 WDR24Q96S15 920 aa12.33□□□□□ -0.43
BCAS3-201ENST00000390652 RMND1Q9NWS8 449 aa12.33□□□□□ -0.43
BCAS3-201ENST00000390652 LAMA4Q16363 1823 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 F5H6K3 240 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 KLRC3Q07444 240 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.44
BCAS3-201ENST00000390652 GLIS3Q8NEA6 775 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 MTRQ99707 1265 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 IMPACTQ9P2X3 320 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
BCAS3-201ENST00000390652 CCDC175P0C221 793 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 LONP1P36776 959 aaKnown RBP12.33□□□□□ -0.44
BCAS3-201ENST00000390652 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
BCAS3-201ENST00000390652 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 SMCR8Q8TEV9 937 aaPredicted RBP12.33□□□□□ -0.44
BCAS3-201ENST00000390652 MED15Q96RN5 788 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 JMJD4Q9H9V9 463 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 SEPT11Q9NVA2 429 aaKnown RBP12.33□□□□□ -0.44
BCAS3-201ENST00000390652 TRIM10Q9UDY6 481 aa12.33□□□□□ -0.44
BCAS3-201ENST00000390652 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
BCAS3-201ENST00000390652 NUP188Q5SRE5 1749 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 POTEB3A0JP26 581 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 POTECB2RU33 542 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 PPP4CP60510 307 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 MDM2Q00987 491 aaPredicted RBP12.32□□□□□ -0.44
BCAS3-201ENST00000390652 SYCP1Q15431 976 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 POTEBQ6S5H4 581 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 TPH2Q8IWU9 490 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 PIGOQ8TEQ8 1089 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 CRAMP1Q96RY5 1269 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 TMEM39BQ9GZU3 492 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 HSD3B7Q9H2F3 369 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 FBXO28Q9NVF7 368 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 CDC25BP30305 580 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 AMPD3Q01432 767 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 DGKZQ13574 1117 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 DCAF17Q5H9S7 520 aaPredicted RBP12.32□□□□□ -0.44
BCAS3-201ENST00000390652 APOBEC3HQ6NTF7 200 aaKnown RBP12.32□□□□□ -0.44
BCAS3-201ENST00000390652 ZNF710Q8N1W2 664 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 CYP2W1Q8TAV3 490 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 ACER1Q8TDN7 264 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 CHP1Q99653 195 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 ERICH4A6NGS2 130 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 ETF1P62495 437 aaKnown RBP12.32□□□□□ -0.44
BCAS3-201ENST00000390652 FAM193AP78312 1265 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 TBC1D5Q92609 795 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 PI4KBQ9UBF8 816 aa12.32□□□□□ -0.44
BCAS3-201ENST00000390652 N4BP2Q86UW6 1770 aaPredicted RBP12.31□□□□□ -0.44
BCAS3-201ENST00000390652 POTEFA5A3E0 1075 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 PPP1R3GB7ZBB8 358 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 ARHGAP6O43182 974 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 IL1R1P14778 569 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 TNNT3P45378 269 aaPredicted RBP12.31□□□□□ -0.44
BCAS3-201ENST00000390652 IRX3P78415 501 aaPredicted RBP12.31□□□□□ -0.44
BCAS3-201ENST00000390652 NCBP1Q09161 790 aaKnown RBP12.31□□□□□ -0.44
BCAS3-201ENST00000390652 POTEGQ6S5H5 508 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 POTEEQ6S8J3 1075 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
BCAS3-201ENST00000390652 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
BCAS3-201ENST00000390652 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
BCAS3-201ENST00000390652 TMEM51Q9NW97 253 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 ABCC6O95255 1503 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 MYH3P11055 1940 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 AKR1B10O60218 316 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 DMTNQ08495 405 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 FAM83BQ5T0W9 1011 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 TUBGCP2Q9BSJ2 902 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 JADE2Q9NQC1 790 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 SHMT1P34896 483 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 GPBP1Q86WP2 473 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 CTAGE1Q96RT6 745 aa12.31□□□□□ -0.44
BCAS3-201ENST00000390652 SHTN1A0MZ66 631 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 SEC31AO94979 1220 aaKnown RBP12.3□□□□□ -0.44
BCAS3-201ENST00000390652 ABL1P00519 1130 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 CRY2Q49AN0 593 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 ZNF658Q5TYW1 1059 aaPredicted RBP12.3□□□□□ -0.44
BCAS3-201ENST00000390652 TC2NQ8N9U0 490 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 LARP4BQ92615 738 aaKnown RBP12.3□□□□□ -0.44
BCAS3-201ENST00000390652 CNOT6LQ96LI5 555 aaKnown RBP12.3□□□□□ -0.44
BCAS3-201ENST00000390652 WDR78Q5VTH9 848 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 NSMFQ6X4W1 530 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 JDP2Q8WYK2 163 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 DDX12PQ92771 950 aa12.3□□□□□ -0.44
BCAS3-201ENST00000390652 MRPL44Q9H9J2 332 aaKnown RBP12.3□□□□□ -0.44
BCAS3-201ENST00000390652 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
BCAS3-201ENST00000390652 TRAPPC10P48553 1259 aa12.29□□□□□ -0.44
BCAS3-201ENST00000390652 CHMP4BP1P59074 171 aa12.29□□□□□ -0.44
BCAS3-201ENST00000390652 TCP11X2Q5H9J9 407 aa12.29□□□□□ -0.44
BCAS3-201ENST00000390652 ANKRD40Q6AI12 368 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms