RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 IQUBQ8NA54 791 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 PIGSQ96S52 555 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 RTEL1Q9NZ71 1219 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 VIRMAQ69YN4 1812 aaKnown RBP20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 TCRBV5S4A2TA0A5A2 114 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 MMP1P03956 469 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 KRT9P35527 623 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 ASIC1P78348 528 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 PTGDRQ13258 359 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 PNMA8AQ86V59 439 aaPredicted RBP20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 OXER1Q8TDS5 423 aa20.92■□□□□ 0.94
PPFIA1-202ENST00000389547 CFBP00751 764 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 NOP2P46087 812 aaKnown RBP20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 PPANQ9NQ55 473 aaKnown RBP20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 E7EVH7 732 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 BUB1BO60566 1050 aaPredicted RBP20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 KIF4AO95239 1232 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 CYLC1P35663 651 aaPredicted RBP20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 NCAPH2Q6IBW4 605 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 PCDHB6Q9Y5E3 794 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 COL14A1Q05707 1796 aaKnown RBP20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 MAP2K1Q02750 393 aaPredicted RBP20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 IFT88Q13099 833 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 SGMS1Q86VZ5 419 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 TAF4BQ92750 862 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 ALDH8A1Q9H2A2 487 aaPredicted RBP20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 SERTAD1Q9UHV2 236 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 SLIT2O94813 1529 aa20.91■□□□□ 0.94
PPFIA1-202ENST00000389547 SSR1P43307 286 aaKnown RBP20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 KIF5AQ12840 1032 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 SLC39A14Q15043 492 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 GRIK5Q16478 980 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 KCPQ6ZWJ8 1503 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 ADCY7P51828 1080 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 VSNL1P62760 191 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 UBXN1Q04323 297 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 STAG2Q8N3U4 1231 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 ALS2CR12Q96Q35 445 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 PI4KBQ9UBF8 816 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 SAR1BQ9Y6B6 198 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 FAM208AQ9UK61 1670 aaKnown RBP20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 FDPSP14324 419 aaKnown RBP20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 ACTN3Q08043 901 aaPredicted RBP20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 DGKHQ86XP1 1220 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 RTKN2Q8IZC4 609 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 PCDHA5Q9Y5H7 936 aa20.9■□□□□ 0.94
PPFIA1-202ENST00000389547 H7C1D1 291 aa20.89■□□□□ 0.94
PPFIA1-202ENST00000389547 KIF1CO43896 1103 aaKnown RBP20.89■□□□□ 0.94
PPFIA1-202ENST00000389547 AKR1B10O60218 316 aa20.89■□□□□ 0.94
PPFIA1-202ENST00000389547 TTLL1O95922 423 aa20.89■□□□□ 0.94
PPFIA1-202ENST00000389547 BIRC2Q13490 618 aa20.89■□□□□ 0.94
PPFIA1-202ENST00000389547 AP1ARQ63HQ0 302 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 IKBKBO14920 756 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 ZRANB2O95218 330 aaKnown RBP eCLIP20.89■□□□□ 0.937e-6■■■■■ 37.3
PPFIA1-202ENST00000389547 SNAP25P60880 206 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 ST3GAL1Q11201 340 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 KRT79Q5XKE5 535 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 TMTC1Q8IUR5 882 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 DPF2Q92785 391 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 LZTS2Q9BRK4 669 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 KIF28PB7ZC32 967 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 TMTC3Q6ZXV5 915 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 RIN2Q8WYP3 895 aaPredicted RBP20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 NAA15Q9BXJ9 866 aaKnown RBP20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 TAOK3Q9H2K8 898 aa20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 LUC7L2Q9Y383 392 aaKnown RBP20.89■□□□□ 0.93
PPFIA1-202ENST00000389547 PLSCR1O15162 318 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 DPEP1P16444 411 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 TDRD12Q587J7 1177 aaKnown RBP20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 ACRBPQ8NEB7 543 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 BLZF1Q9H2G9 400 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 HPS5Q9UPZ3 1129 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 PARP4Q9UKK3 1724 aaKnown RBP20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 KRT83P78385 493 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 MAP3K9P80192 1104 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 TBC1D31Q96DN5 1066 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 ZNF408Q9H9D4 720 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 USP17L5A8MUK1 530 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 AKR1B1P15121 316 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 CYP26C1Q6V0L0 522 aa20.88■□□□□ 0.93
PPFIA1-202ENST00000389547 FLT1P17948 1338 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 TACC1O75410 805 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 GH2P01242 217 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 MLKLQ8NB16 471 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 A0A1W2PQ27 194 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 A0A1W2PQ64 194 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 A0A1W2PQD8 194 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 CIAPIN1Q6FI81 312 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 ARFGAP2Q8N6H7 521 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 CCDC17Q96LX7 622 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 LUC7LQ9NQ29 371 aaKnown RBP20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 POLR3EQ9NVU0 708 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 PCDHA1Q9Y5I3 950 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 SP4Q02446 784 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 POTEAQ6S8J7 498 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 KCNQ5Q9NR82 932 aa20.87■□□□□ 0.93
PPFIA1-202ENST00000389547 PRPF3O43395 683 aaKnown RBP20.86■□□□□ 0.93
PPFIA1-202ENST00000389547 CMA1P23946 247 aa20.86■□□□□ 0.93
PPFIA1-202ENST00000389547 AMPD3Q01432 767 aa20.86■□□□□ 0.93
PPFIA1-202ENST00000389547 TRIM47Q96LD4 638 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms