RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 CBX8Q9HC52 389 aa0.92□□□□□ -2.26
RNU6-540P-201ENST00000384622 ZNF70Q9UC06 446 aaPredicted RBP0.92□□□□□ -2.26
RNU6-540P-201ENST00000384622 FOXD3Q9UJU5 478 aaPredicted RBP0.92□□□□□ -2.26
RNU6-540P-201ENST00000384622 WDR91A4D1P6 747 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 PRSS47A8MTI9 375 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 RAD17O75943 681 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 NTN1O95631 604 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 ELLP55199 621 aaPredicted RBP0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 VPS72Q15906 364 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 YTHDC1Q96MU7 727 aaKnown RBP0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 KREMEN1Q96MU8 473 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 SYT3Q9BQG1 590 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 WNT10AQ9GZT5 417 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 ASCC2Q9H1I8 757 aaPredicted RBP0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 ALG2Q9H553 416 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 ANTXR1Q9H6X2 564 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 BARX1Q9HBU1 254 aaPredicted RBP0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 IGSF5Q9NSI5 407 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 TMEM39AQ9NV64 488 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 GPRC5BQ9NZH0 403 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 GPN3Q9UHW5 284 aaPredicted RBP0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 PCDHA4Q9UN74 947 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 ZKSCAN5Q9Y2L8 839 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 INSL6Q9Y581 213 aa0.91□□□□□ -2.26
RNU6-540P-201ENST00000384622 ZNF185O15231 689 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 ZNF28P17035 718 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 CCKARP32238 428 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 PTGS2P35354 604 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 CCT4P50991 539 aaKnown RBP0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 TROAPQ12815 778 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 NAA30Q147X3 362 aaPredicted RBP0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 MRGPREQ86SM8 312 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 KLHL36Q8N4N3 616 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 ZNF808Q8N4W9 903 aaPredicted RBP0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 BOLLQ8N9W6 283 aaKnown RBP0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 DNAJB8Q8NHS0 232 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 HAS1Q92839 578 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 FUBP1Q96AE4 644 aaKnown RBP0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 TSPAN17Q96FV3 270 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 FCRL4Q96PJ5 515 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 JMJD8Q96S16 334 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 EHD4Q9H223 541 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 CACNA2D2Q9NY47 1150 aa0.9□□□□□ -2.27
RNU6-540P-201ENST00000384622 H0Y858 1186 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 NTN3O00634 580 aaPredicted RBP0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 ATP9BO43861 1147 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 PDGFAP04085 211 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 C8BP07358 591 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 SYPP08247 313 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 SNHG28P0DPA3 235 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 IL13P35225 146 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 POU4F1Q01851 419 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 ZNF252P-AS1Q0IIN9 211 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 NFATC3Q12968 1075 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 HECTD2Q5U5R9 776 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 KIAA1161Q6NSJ0 714 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 TMPRSS12Q86WS5 348 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 TMPRSS6Q8IU80 811 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 LINC00116Q8NCU8 138 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 ENOX1Q8TC92 643 aaKnown RBP0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 DPH2Q9BQC3 489 aaPredicted RBP0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 ZFYVE28Q9HCC9 887 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 GOPCQ9HD26 462 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 TLR9Q9NR96 1032 aa0.89□□□□□ -2.27
RNU6-540P-201ENST00000384622 IGKV2D-30A0A075B6S6 120 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 RBMXL2O75526 392 aaKnown RBP0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 MCAMP43121 646 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 PTH2RP49190 550 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 SRSF4Q08170 494 aaKnown RBP0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 PCOLCEQ15113 449 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 PTPAQ15257 358 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 BBS9Q3SYG4 887 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 KIAA0319Q5VV43 1072 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 PDPRQ8NCN5 879 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 SYTL5Q8TDW5 730 aaPredicted RBP0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 TCTN2Q96GX1 697 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 RXFP1Q9HBX9 757 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 GDPD2Q9HCC8 539 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 PDLIM7Q9NR12 457 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 ERVK13-1Q9NX77 482 aa0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 COL11A2P13942 1736 aaPredicted RBP0.88□□□□□ -2.27
RNU6-540P-201ENST00000384622 A0A1B0GVY2 172 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 GRID2IPA4D2P6 1211 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 INSIG1O15503 277 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 B3GALT2O43825 422 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 TRIM37O94972 964 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 NME2P22392 152 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 PTGER1P34995 402 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 ITGA1P56199 1179 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 INPP5AQ14642 412 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 SLC9A5Q14940 896 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 CD300LDQ6UXZ3 194 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 GPRIN1Q7Z2K8 1008 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 ANKMY2Q8IV38 441 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 GALNT12Q8IXK2 581 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 SAMD14Q8IZD0 417 aaPredicted RBP0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 LRFN3Q9BTN0 628 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 ARHGAP20Q9P2F6 1191 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 RBPJLQ9UBG7 517 aa0.87□□□□□ -2.27
RNU6-540P-201ENST00000384622 FTSJ1Q9UET6 329 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms