RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
VCX3B-201ENST00000381029 SGPL1O95470 568 aa17.16■□□□□ 0.34
VCX3B-201ENST00000381029 EDNRBP24530 442 aa17.16■□□□□ 0.34
VCX3B-201ENST00000381029 ADD1P35611 737 aaKnown RBP17.16■□□□□ 0.34
VCX3B-201ENST00000381029 HSD17B4P51659 736 aa17.16■□□□□ 0.34
VCX3B-201ENST00000381029 PPP2R5BQ15173 497 aa17.16■□□□□ 0.34
VCX3B-201ENST00000381029 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
VCX3B-201ENST00000381029 DEFB118Q96PH6 123 aa17.16■□□□□ 0.34
VCX3B-201ENST00000381029 TMEM106CQ9BVX2 250 aa17.16■□□□□ 0.34
VCX3B-201ENST00000381029 MRPL11Q9Y3B7 192 aaKnown RBP17.16■□□□□ 0.34
VCX3B-201ENST00000381029 PCDHA1Q9Y5I3 950 aa17.16■□□□□ 0.34
VCX3B-201ENST00000381029 GOLGA8AA7E2F4 631 aa17.15■□□□□ 0.34
VCX3B-201ENST00000381029 GOLGA8BA8MQT2 603 aa17.15■□□□□ 0.34
VCX3B-201ENST00000381029 RBM25P49756 843 aaKnown RBP17.15■□□□□ 0.34
VCX3B-201ENST00000381029 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
VCX3B-201ENST00000381029 ARMCX2Q7L311 632 aa17.15■□□□□ 0.34
VCX3B-201ENST00000381029 SYTL5Q8TDW5 730 aaPredicted RBP17.15■□□□□ 0.34
VCX3B-201ENST00000381029 PDRG1Q9NUG6 133 aa17.15■□□□□ 0.34
VCX3B-201ENST00000381029 OGDHLQ9ULD0 1010 aa17.15■□□□□ 0.34
VCX3B-201ENST00000381029 MYH6P13533 1939 aa17.14■□□□□ 0.33
VCX3B-201ENST00000381029 LRRC37A2A6NM11 1700 aa17.14■□□□□ 0.33
VCX3B-201ENST00000381029 LOC102724159A0A0B4J2E5 919 aa17.14■□□□□ 0.33
VCX3B-201ENST00000381029 METAP2P50579 478 aaKnown RBP eCLIP17.14■□□□□ 0.33
VCX3B-201ENST00000381029 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
VCX3B-201ENST00000381029 PWP2Q15269 919 aaKnown RBP17.14■□□□□ 0.33
VCX3B-201ENST00000381029 RRP36Q96EU6 259 aaKnown RBP17.14■□□□□ 0.33
VCX3B-201ENST00000381029 ZNF274Q96GC6 653 aaPredicted RBP17.14■□□□□ 0.33
VCX3B-201ENST00000381029 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.14■□□□□ 0.33
VCX3B-201ENST00000381029 TNRC18O15417 2968 aaPredicted RBP17.13■□□□□ 0.33
VCX3B-201ENST00000381029 MCM3APO60318 1980 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 hCG_1642624A0A1W2PR95 340 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 SEPT4O43236 478 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 ADCY6O43306 1168 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 ALDH5A1P51649 535 aaPredicted RBP17.13■□□□□ 0.33
VCX3B-201ENST00000381029 FGD1P98174 961 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 TYW1BQ6NUM6 668 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 MCF2L2Q86YR7 1114 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 CCDC82Q8N4S0 544 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 DNERQ8NFT8 737 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 PIBF1Q8WXW3 757 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
VCX3B-201ENST00000381029 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
VCX3B-201ENST00000381029 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
VCX3B-201ENST00000381029 ASB14A6NK59 587 aa17.12■□□□□ 0.33
VCX3B-201ENST00000381029 CAPN2P17655 700 aa17.12■□□□□ 0.33
VCX3B-201ENST00000381029 CALML3P27482 149 aa17.12■□□□□ 0.33
VCX3B-201ENST00000381029 SAMD3Q8N6K7 520 aa17.12■□□□□ 0.33
VCX3B-201ENST00000381029 TAAR1Q96RJ0 339 aa17.12■□□□□ 0.33
VCX3B-201ENST00000381029 ABHD16BQ9H3Z7 469 aa17.12■□□□□ 0.33
VCX3B-201ENST00000381029 NCOA5Q9HCD5 579 aaKnown RBP17.12■□□□□ 0.33
VCX3B-201ENST00000381029 MAP3K20Q9NYL2 800 aaKnown RBP17.12■□□□□ 0.33
VCX3B-201ENST00000381029 MEIS2O14770 477 aa17.11■□□□□ 0.33
VCX3B-201ENST00000381029 AK2P54819 239 aa17.11■□□□□ 0.33
VCX3B-201ENST00000381029 TRAF1Q13077 416 aa17.11■□□□□ 0.33
VCX3B-201ENST00000381029 ACVR2BQ13705 512 aa17.11■□□□□ 0.33
VCX3B-201ENST00000381029 PKN1Q16512 942 aa17.11■□□□□ 0.33
VCX3B-201ENST00000381029 WWC2Q6AWC2 1192 aa17.11■□□□□ 0.33
VCX3B-201ENST00000381029 TAPT1Q6NXT6 567 aa17.11■□□□□ 0.33
VCX3B-201ENST00000381029 ADD3Q9UEY8 706 aaKnown RBP17.11■□□□□ 0.33
VCX3B-201ENST00000381029 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
VCX3B-201ENST00000381029 FRMPD3Q5JV73 1810 aa17.11■□□□□ 0.33
VCX3B-201ENST00000381029 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
VCX3B-201ENST00000381029 CFBP00751 764 aa17.1■□□□□ 0.33
VCX3B-201ENST00000381029 IFNAR1P17181 557 aa17.1■□□□□ 0.33
VCX3B-201ENST00000381029 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
VCX3B-201ENST00000381029 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
VCX3B-201ENST00000381029 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
VCX3B-201ENST00000381029 RBM47A0AV96 593 aaKnown RBP17.09■□□□□ 0.33
VCX3B-201ENST00000381029 PIK3CDO00329 1044 aa17.09■□□□□ 0.33
VCX3B-201ENST00000381029 PRPF3O43395 683 aaKnown RBP17.09■□□□□ 0.33
VCX3B-201ENST00000381029 MSCO60682 206 aa17.09■□□□□ 0.33
VCX3B-201ENST00000381029 PFKFB2O60825 505 aa17.09■□□□□ 0.33
VCX3B-201ENST00000381029 LARGE1O95461 756 aa17.09■□□□□ 0.33
VCX3B-201ENST00000381029 HOXA13P31271 388 aaPredicted RBP17.09■□□□□ 0.33
VCX3B-201ENST00000381029 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
VCX3B-201ENST00000381029 CCDC144BQ3MJ40 725 aa17.09■□□□□ 0.33
VCX3B-201ENST00000381029 ANKLE1Q8NAG6 615 aa17.09■□□□□ 0.33
VCX3B-201ENST00000381029 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
VCX3B-201ENST00000381029 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
VCX3B-201ENST00000381029 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
VCX3B-201ENST00000381029 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
VCX3B-201ENST00000381029 GCOM1H8Y6P7 765 aaPredicted RBP17.08■□□□□ 0.32
VCX3B-201ENST00000381029 STXBP3O00186 592 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 ADAMTS4O75173 837 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 POLR2MP0CAP2 368 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 COL6A1P12109 1028 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 AKR1A1P14550 325 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 NEK4P51957 841 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 NKX3-2P78367 333 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 SCRN1Q12765 414 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 TMEM63BQ5T3F8 832 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 DIS3LQ8TF46 1054 aaKnown RBP17.08■□□□□ 0.32
VCX3B-201ENST00000381029 PHKBQ93100 1093 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 LENG1Q96BZ8 264 aaPredicted RBP17.08■□□□□ 0.32
VCX3B-201ENST00000381029 RMDN3Q96TC7 470 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.32
VCX3B-201ENST00000381029 VTA1Q9NP79 307 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 PXMP2Q9NR77 195 aa17.08■□□□□ 0.32
VCX3B-201ENST00000381029 PDGFCQ9NRA1 345 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms