RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 NUDT12Q9BQG2 462 aa12.22□□□□□ -0.45
DNMT3A-203ENST00000380746 ABHD10Q9NUJ1 306 aa12.22□□□□□ -0.45
DNMT3A-203ENST00000380746 VPS18Q9P253 973 aa12.22□□□□□ -0.45
DNMT3A-203ENST00000380746 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
DNMT3A-203ENST00000380746 E9PMD0 336 aa12.21□□□□□ -0.45
DNMT3A-203ENST00000380746 SLC37A4O43826 429 aa12.21□□□□□ -0.45
DNMT3A-203ENST00000380746 CFBP00751 764 aa12.21□□□□□ -0.45
DNMT3A-203ENST00000380746 PABPC4Q13310 644 aaKnown RBP eCLIP12.21□□□□□ -0.45
DNMT3A-203ENST00000380746 GJD4Q96KN9 370 aaPredicted RBP12.21□□□□□ -0.45
DNMT3A-203ENST00000380746 RAB34Q9BZG1 259 aa12.21□□□□□ -0.45
DNMT3A-203ENST00000380746 SMARCAL1Q9NZC9 954 aa12.21□□□□□ -0.45
DNMT3A-203ENST00000380746 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
DNMT3A-203ENST00000380746 SORBS3O60504 671 aa12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 PLEKP08567 350 aaPredicted RBP12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 TM4SF1P30408 202 aa12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 CHRNA5P30532 468 aa12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 ERVK-24P63145 666 aa12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 APBA1Q02410 837 aa12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 TMTC1Q8IUR5 882 aa12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 JAKMIP2Q96AA8 810 aa12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 SH2D3AQ9BRG2 576 aa12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 BAZ2AQ9UIF9 1905 aaKnown RBP12.21□□□□□ -0.46
DNMT3A-203ENST00000380746 PNMA6AP0CW24 399 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 GYS1P13807 737 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 ZSCAN20P17040 1043 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 OAS2P29728 719 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 TMC4Q7Z404 712 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 HOMER2Q9NSB8 354 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 DDX25Q9UHL0 483 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 RWDD2AQ9UIY3 292 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 FANCGO15287 622 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 NOP2P46087 812 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 SP4Q02446 784 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 RAPGEF1Q13905 1077 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 BARGINQ6ZT62 677 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 GOLGA6L1Q8N7Z2 621 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 TDRD3Q9H7E2 651 aaKnown RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 H7C1D1 291 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 NKRFO15226 690 aaKnown RBP eCLIP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 ZNF185O15231 689 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 KIF5AQ12840 1032 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 SEPT2Q15019 361 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 TEKT1Q969V4 418 aa12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
DNMT3A-203ENST00000380746 VPS72Q15906 364 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 SLC10A5Q5PT55 438 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 TAF3Q5VWG9 929 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 ADGRF4Q8IZF3 695 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 P2RX5Q93086 422 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 TSG101Q99816 390 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 ZNF446Q9NWS9 450 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 TMCO5BA8MYB1 307 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 RAD17O75943 681 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 CPXCR1Q8N123 301 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 LARP4BQ92615 738 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 ZNF142P52746 1687 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 NDUFA10O95299 355 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 CYLC1P35663 651 aaPredicted RBP12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 GPS2Q13227 327 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 DDX12PQ92771 950 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 CCDC43Q96MW1 224 aaKnown RBP12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 SAMM50Q9Y512 469 aa12.19□□□□□ -0.46
DNMT3A-203ENST00000380746 PHLPP2Q6ZVD8 1323 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 POTEB3A0JP26 581 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 EFCAB8A8MWE9 144 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 POTECB2RU33 542 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 TADA3O75528 432 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 SMC1AQ14683 1233 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 GPBP1Q86WP2 473 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 KIFC2Q96AC6 838 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 ATRNO75882 1429 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 SPDYE3A6NKU9 549 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 PDHBP11177 359 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 CHRM1P11229 460 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 USP8P40818 1118 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 SBK1Q52WX2 424 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 SLFN13Q68D06 897 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 PYM1Q9BRP8 204 aaKnown RBP12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 TRIM9Q9C026 710 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 PDE11AQ9HCR9 933 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 TCEAL9Q9UHQ7 104 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 MYMKA6NI61 221 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 CLIC2O15247 247 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 ERLIN1O75477 346 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 DDR1Q08345 913 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 LLGL1Q15334 1064 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 NAALADL2Q58DX5 795 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms