RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 GRIN2DO15399 1336 aa19.81■□□□□ 0.76
SMN2-201ENST00000380741 CSF2RAP15509 400 aa19.81■□□□□ 0.76
SMN2-201ENST00000380741 CALML3P27482 149 aa19.81■□□□□ 0.76
SMN2-201ENST00000380741 ITGA7Q13683 1181 aa19.81■□□□□ 0.76
SMN2-201ENST00000380741 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMN2-201ENST00000380741 EXOC6Q8TAG9 804 aa19.81■□□□□ 0.76
SMN2-201ENST00000380741 MYLIPQ8WY64 445 aa19.81■□□□□ 0.76
SMN2-201ENST00000380741 ESR2Q92731 530 aa19.81■□□□□ 0.76
SMN2-201ENST00000380741 TMEM265A0A087WTH1 108 aa19.8■□□□□ 0.76
SMN2-201ENST00000380741 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.8■□□□□ 0.76
SMN2-201ENST00000380741 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.8■□□□□ 0.76
SMN2-201ENST00000380741 ZNF213O14771 459 aa19.8■□□□□ 0.76
SMN2-201ENST00000380741 ZEB2O60315 1214 aa19.8■□□□□ 0.76
SMN2-201ENST00000380741 DUSP28Q4G0W2 176 aa19.8■□□□□ 0.76
SMN2-201ENST00000380741 TMEM240Q5SV17 173 aa19.8■□□□□ 0.76
SMN2-201ENST00000380741 RNF207Q6ZRF8 634 aa19.8■□□□□ 0.76
SMN2-201ENST00000380741 TMEM199Q8N511 208 aa19.8■□□□□ 0.76
SMN2-201ENST00000380741 DIAPH3Q9NSV4 1193 aa19.8■□□□□ 0.76
SMN2-201ENST00000380741 WDR19Q8NEZ3 1342 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 LOC102724159A0A0B4J2E5 919 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 GOLGA8HP0CJ92 632 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 ACRP10323 421 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 DNAJB2P25686 324 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 CYP2C18P33260 490 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 PSMC6P62333 389 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 PWP2Q15269 919 aaKnown RBP19.79■□□□□ 0.76
SMN2-201ENST00000380741 MAFAQ8NHW3 353 aaPredicted RBP19.79■□□□□ 0.76
SMN2-201ENST00000380741 WDR11Q9BZH6 1224 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 CPVLQ9H3G5 476 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 PNMA2Q9UL42 364 aa19.79■□□□□ 0.76
SMN2-201ENST00000380741 UMODL1Q5DID0 1318 aa19.78■□□□□ 0.76
SMN2-201ENST00000380741 KDM4AO75164 1064 aa19.78■□□□□ 0.76
SMN2-201ENST00000380741 RPS6P62753 249 aaKnown RBP19.78■□□□□ 0.76
SMN2-201ENST00000380741 GPATCH4Q5T3I0 446 aaKnown RBP19.78■□□□□ 0.76
SMN2-201ENST00000380741 DGKHQ86XP1 1220 aa19.78■□□□□ 0.76
SMN2-201ENST00000380741 TRPV6Q9H1D0 765 aa19.78■□□□□ 0.76
SMN2-201ENST00000380741 MYH6P13533 1939 aa19.78■□□□□ 0.76
SMN2-201ENST00000380741 B4GALT4O60513 344 aa19.77■□□□□ 0.76
SMN2-201ENST00000380741 FOSL2P15408 326 aa19.77■□□□□ 0.76
SMN2-201ENST00000380741 RASIP1Q5U651 963 aa19.77■□□□□ 0.76
SMN2-201ENST00000380741 PSRC1Q6PGN9 363 aaPredicted RBP19.77■□□□□ 0.76
SMN2-201ENST00000380741 ZNF365Q70YC5 407 aa19.77■□□□□ 0.76
SMN2-201ENST00000380741 IQCA1Q86XH1 822 aa19.77■□□□□ 0.76
SMN2-201ENST00000380741 PNMA1Q8ND90 353 aa19.77■□□□□ 0.76
SMN2-201ENST00000380741 SEZ6LQ9BYH1 1024 aa19.77■□□□□ 0.76
SMN2-201ENST00000380741 HIPK3Q9H422 1215 aa19.77■□□□□ 0.76
SMN2-201ENST00000380741 SPTBN5Q9NRC6 3674 aaKnown RBP19.76■□□□□ 0.75
SMN2-201ENST00000380741 CHD9Q3L8U1 2897 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 RBM47A0AV96 593 aaKnown RBP19.76■□□□□ 0.75
SMN2-201ENST00000380741 B4E1Z4 1266 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 HIP1O00291 1037 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 EDNRBP24530 442 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 NT5C2P49902 561 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 PDE4DQ08499 809 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 USH1GQ495M9 461 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 UBA5Q9GZZ9 404 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 IL23AQ9NPF7 189 aa19.76■□□□□ 0.75
SMN2-201ENST00000380741 GBF1Q92538 1859 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 GRXCR1A8MXD5 290 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 GRIN2CQ14957 1233 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 CCDC178Q5BJE1 867 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 DNERQ8NFT8 737 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 ANKS1AQ92625 1134 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 TIFAQ96CG3 184 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 ZSCAN10Q96SZ4 725 aaPredicted RBP19.75■□□□□ 0.75
SMN2-201ENST00000380741 MPHOSPH6Q99547 160 aaKnown RBP19.75■□□□□ 0.75
SMN2-201ENST00000380741 DSCC1Q9BVC3 393 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 NOC4LQ9BVI4 516 aaKnown RBP19.75■□□□□ 0.75
SMN2-201ENST00000380741 KAT14Q9H8E8 782 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 SCN10AQ9Y5Y9 1956 aa19.75■□□□□ 0.75
SMN2-201ENST00000380741 PBX2P40425 430 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 CPT1AP50416 773 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 CCL23P55773 120 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 PURAQ00577 322 aaKnown RBP19.74■□□□□ 0.75
SMN2-201ENST00000380741 PPP2R5BQ15173 497 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 CDC37Q16543 378 aaPredicted RBP19.74■□□□□ 0.75
SMN2-201ENST00000380741 ENAHQ8N8S7 591 aaPredicted RBP19.74■□□□□ 0.75
SMN2-201ENST00000380741 OR6J1Q8NGC5 347 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 COL25A1Q9BXS0 654 aaPredicted RBP19.74■□□□□ 0.75
SMN2-201ENST00000380741 PBX4Q9BYU1 374 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 WNT8AQ9H1J5 351 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 ALDH8A1Q9H2A2 487 aaPredicted RBP19.74■□□□□ 0.75
SMN2-201ENST00000380741 ZNF576Q9H609 170 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 POLR3EQ9NVU0 708 aa19.74■□□□□ 0.75
SMN2-201ENST00000380741 MYO9BQ13459 2157 aa19.73■□□□□ 0.75
SMN2-201ENST00000380741 MYL3P08590 195 aa19.73■□□□□ 0.75
SMN2-201ENST00000380741 IMMTQ16891 758 aaKnown RBP19.73■□□□□ 0.75
SMN2-201ENST00000380741 RGS22Q8NE09 1264 aa19.73■□□□□ 0.75
SMN2-201ENST00000380741 SCFD2Q8WU76 684 aa19.73■□□□□ 0.75
SMN2-201ENST00000380741 HERVK_113Q902F9 699 aa19.73■□□□□ 0.75
SMN2-201ENST00000380741 IL25Q9H293 177 aa19.73■□□□□ 0.75
SMN2-201ENST00000380741 TRMT13Q9NUP7 481 aaKnown RBP19.73■□□□□ 0.75
SMN2-201ENST00000380741 CXXC1Q9P0U4 656 aaPredicted RBP19.73■□□□□ 0.75
SMN2-201ENST00000380741 ZSWIM5Q9P217 1185 aa19.73■□□□□ 0.75
SMN2-201ENST00000380741 TNKSO95271 1327 aa19.73■□□□□ 0.75
SMN2-201ENST00000380741 NKRFO15226 690 aaKnown RBP eCLIP19.72■□□□□ 0.75
SMN2-201ENST00000380741 ASPRV1Q53RT3 343 aa19.72■□□□□ 0.75
SMN2-201ENST00000380741 ADGRF4Q8IZF3 695 aa19.72■□□□□ 0.75
SMN2-201ENST00000380741 COPS5Q92905 334 aa19.72■□□□□ 0.75
SMN2-201ENST00000380741 MTG1Q9BT17 334 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms