RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 TEX11Q8IYF3 940 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 NEK11Q8NG66 645 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 IQCDQ96DY2 449 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
VPS16-203ENST00000380469 ACBD3Q9H3P7 528 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 MYH1P12882 1939 aa18.23■□□□□ 0.51
VPS16-203ENST00000380469 HNRNPH2P55795 449 aaKnown RBP18.22■□□□□ 0.51
VPS16-203ENST00000380469 PAPD7Q5XG87 772 aaKnown RBP18.22■□□□□ 0.51
VPS16-203ENST00000380469 SV2BQ7L1I2 683 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 TBCKQ8TEA7 893 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 EEF2KMTQ96G04 330 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 PSD3Q9NYI0 1048 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 ATP1A1P05023 1023 aaKnown RBP18.22■□□□□ 0.51
VPS16-203ENST00000380469 FCER1AP12319 257 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 PLCG2P16885 1265 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 CKAP4Q07065 602 aaKnown RBP18.22■□□□□ 0.51
VPS16-203ENST00000380469 CASP8Q14790 479 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 NFIXQ14938 502 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 COBLL1Q53SF7 1204 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 REXO1Q8N1G1 1221 aaKnown RBP18.22■□□□□ 0.51
VPS16-203ENST00000380469 RPGRIP1Q96KN7 1286 aa18.22■□□□□ 0.51
VPS16-203ENST00000380469 A0A1W2PQJ5 194 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 RASSF10A6NK89 507 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 KLK7P49862 253 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 GYS2P54840 703 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 FIGNQ5HY92 759 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 PTF1AQ7RTS3 328 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 ZSCAN29Q8IWY8 852 aaPredicted RBP18.21■□□□□ 0.51
VPS16-203ENST00000380469 ERGIC2Q96RQ1 377 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 PIGSQ96S52 555 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 BIN2Q9UBW5 565 aaPredicted RBP18.21■□□□□ 0.51
VPS16-203ENST00000380469 CCNL1Q9UK58 526 aaPredicted RBP18.21■□□□□ 0.51
VPS16-203ENST00000380469 RFC4P35249 363 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 TXKP42681 527 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 CDK17Q00537 523 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 HSP90B2PQ58FF3 399 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 C15orf52Q6ZUT6 534 aaKnown RBP18.21■□□□□ 0.51
VPS16-203ENST00000380469 SUGCTQ9HAC7 445 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 TFR2Q9UP52 801 aa18.21■□□□□ 0.51
VPS16-203ENST00000380469 GPR75-ASB3A0A0A6YYF3 556 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 USP14P54578 494 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 SPA17Q15506 151 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 MIIPQ5JXC2 388 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 CDK5RAP3Q96JB5 506 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 GPR101Q96P66 508 aaPredicted RBP18.2■□□□□ 0.5
VPS16-203ENST00000380469 TSGA10Q9BZW7 698 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 VPS18Q9P253 973 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 ESYT2A0FGR8 921 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 FGFR1OPO95684 399 aaKnown RBP18.2■□□□□ 0.5
VPS16-203ENST00000380469 KIF5AQ12840 1032 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 TMEM266Q2M3C6 531 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 SLF2Q8IX21 1173 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 CEP95Q96GE4 821 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 CCDC42Q96M95 316 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 MMS19Q96T76 1030 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 MMTAG2Q9BU76 263 aaKnown RBP18.2■□□□□ 0.5
VPS16-203ENST00000380469 SLC39A2Q9NP94 309 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 LRWD1Q9UFC0 647 aa18.2■□□□□ 0.5
VPS16-203ENST00000380469 SBF2Q86WG5 1849 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 hCG_1984214I3L0E3 225 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 LMAN1P49257 510 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 CALCRLQ16602 461 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 MAP9Q49MG5 647 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 ZNF713Q8N859 430 aaPredicted RBP18.19■□□□□ 0.5
VPS16-203ENST00000380469 CAGE1Q8TC20 777 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 SEMA6BQ9H3T3 888 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 CD209Q9NNX6 404 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 STK17AQ9UEE5 414 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 SNED1Q8TER0 1413 aa18.19■□□□□ 0.5
VPS16-203ENST00000380469 ANO9A1A5B4 782 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 SRGAP2O75044 1071 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 CENPPQ6IPU0 288 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 SLC51AQ86UW1 340 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 CNBD1Q8NA66 436 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 KIAA0895Q8NCT3 520 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 CAPZA3Q96KX2 299 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 RAB34Q9BZG1 259 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 LACRTQ9GZZ8 138 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 PVALEFA0A1B0GWK0 134 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 USP17L5A8MUK1 530 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 VAV2P52735 878 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 VWA3BQ502W6 1294 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 TRAPPC3LQ5T215 181 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 UNC13DQ70J99 1090 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 RPGRQ92834 1020 aaKnown RBP18.18■□□□□ 0.5
VPS16-203ENST00000380469 UBA5Q9GZZ9 404 aa18.18■□□□□ 0.5
VPS16-203ENST00000380469 TNRC6CQ9HCJ0 1690 aaKnown RBP18.17■□□□□ 0.5
VPS16-203ENST00000380469 TARSL2A2RTX5 802 aaKnown RBP18.17■□□□□ 0.5
VPS16-203ENST00000380469 RCCD1A6NED2 376 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 USO1O60763 962 aaKnown RBP18.17■□□□□ 0.5
VPS16-203ENST00000380469 UFL1O94874 794 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 GPSM2P81274 684 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 GRB10Q13322 594 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 FAM71BQ8TC56 605 aa18.17■□□□□ 0.5
VPS16-203ENST00000380469 SECISBP2LQ93073 1101 aaKnown RBP18.17■□□□□ 0.5
VPS16-203ENST00000380469 HPS3Q969F9 1004 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms