RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 TRAF1Q13077 416 aa16.08■□□□□ 0.17
TPM2-204ENST00000378300 KRT25Q7Z3Z0 450 aa16.08■□□□□ 0.17
TPM2-204ENST00000378300 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.17
TPM2-204ENST00000378300 RCOR1Q9UKL0 485 aa16.08■□□□□ 0.17
TPM2-204ENST00000378300 ATP2A1O14983 1001 aa16.08■□□□□ 0.16
TPM2-204ENST00000378300 CNMDO75829 334 aa16.08■□□□□ 0.16
TPM2-204ENST00000378300 OAZ1P54368 228 aa16.08■□□□□ 0.16
TPM2-204ENST00000378300 ZNF174Q15697 407 aa16.08■□□□□ 0.16
TPM2-204ENST00000378300 TTC38Q5R3I4 469 aa16.08■□□□□ 0.16
TPM2-204ENST00000378300 TRERF1Q96PN7 1200 aa16.08■□□□□ 0.16
TPM2-204ENST00000378300 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
TPM2-204ENST00000378300 NOL7Q9UMY1 257 aaKnown RBP16.08■□□□□ 0.16
TPM2-204ENST00000378300 FAM155AB1AL88 458 aaPredicted RBP16.07■□□□□ 0.16
TPM2-204ENST00000378300 PIK3CDO00329 1044 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 SLC10A3P09131 477 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 STAT3P40763 770 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 FCHSD1Q86WN1 690 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 TEX13BQ9BXU2 312 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 PANK2Q9BZ23 570 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 GLT8D2Q9H1C3 349 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 R3HDMLQ9H3Y0 253 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.07■□□□□ 0.16
TPM2-204ENST00000378300 RNF146Q9NTX7 359 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 RBPJLQ9UBG7 517 aa16.07■□□□□ 0.16
TPM2-204ENST00000378300 YEATS4O95619 227 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 OSBPP22059 807 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
TPM2-204ENST00000378300 MCM7P33993 719 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 FSTL1Q12841 308 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 PABPC4Q13310 644 aaKnown RBP eCLIP16.06■□□□□ 0.16
TPM2-204ENST00000378300 SLC39A14Q15043 492 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 STK38Q15208 465 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 ANO3Q9BYT9 981 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 ELP1O95163 1332 aa16.06■□□□□ 0.16
TPM2-204ENST00000378300 GCOM1H8Y6P7 765 aaPredicted RBP16.05■□□□□ 0.16
TPM2-204ENST00000378300 POLR2MP0CAP2 368 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 GRM1Q13255 1194 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 LETM2Q2VYF4 491 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 Q3C1V9 767 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 ANKRD23Q86SG2 305 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 ZIC5Q96T25 663 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 MYH7BA7E2Y1 1941 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 IGF2BP3O00425 579 aaKnown RBP eCLIP16.05■□□□□ 0.16
TPM2-204ENST00000378300 SPTLC2O15270 562 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 TRAPPC10P48553 1259 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 HSD17B4P51659 736 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 AP3B2Q13367 1082 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 NSMFQ6X4W1 530 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 SLC30A10Q6XR72 485 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 MB21D1Q8N884 522 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
TPM2-204ENST00000378300 SPATC1LQ9H0A9 340 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 PCDHA7Q9UN72 937 aa16.05■□□□□ 0.16
TPM2-204ENST00000378300 TESPA1A2RU30 521 aaPredicted RBP16.04■□□□□ 0.16
TPM2-204ENST00000378300 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
TPM2-204ENST00000378300 PRKCSHP14314 528 aaPredicted RBP16.04■□□□□ 0.16
TPM2-204ENST00000378300 ME1P48163 572 aa16.04■□□□□ 0.16
TPM2-204ENST00000378300 GPT2Q8TD30 523 aa16.04■□□□□ 0.16
TPM2-204ENST00000378300 CRYGNQ8WXF5 182 aa16.04■□□□□ 0.16
TPM2-204ENST00000378300 SLC45A1Q9Y2W3 748 aa16.04■□□□□ 0.16
TPM2-204ENST00000378300 CCNT1O60563 726 aaKnown RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 TDP2O95551 362 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 RPS6P62753 249 aaKnown RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 UBXN2AP68543 259 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 GHRHRQ02643 423 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 GRIN1Q05586 938 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 PTGDRQ13258 359 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 CSPP1Q1MSJ5 1256 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 CYP4F22Q6NT55 531 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 MCF2L2Q86YR7 1114 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 RIOX2Q8IUF8 465 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 SMCR8Q8TEV9 937 aaPredicted RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 CLIC6Q96NY7 704 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 MOV10L1Q9BXT6 1211 aaKnown RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 PNMA3Q9UL41 463 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 PNMA2Q9UL42 364 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 RBBP6Q7Z6E9 1792 aaKnown RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 MANSC4A6NHS7 340 aaPredicted RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 FOSP01100 380 aaPredicted RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 ARHGAP4P98171 946 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 PAXIP1Q6ZW49 1069 aaPredicted RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 C4orf32Q8N8J7 132 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 KCNG4Q8TDN1 519 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 SYTL5Q8TDW5 730 aaPredicted RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 TMEM60Q9H2L4 133 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 ACAD9Q9H845 621 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
TPM2-204ENST00000378300 RABGAP1Q9Y3P9 1069 aa16.03■□□□□ 0.16
TPM2-204ENST00000378300 SREBF1P36956 1147 aa16.02■□□□□ 0.15
TPM2-204ENST00000378300 UBE2HP62256 183 aa16.02■□□□□ 0.15
TPM2-204ENST00000378300 BAATQ14032 418 aaPredicted RBP16.02■□□□□ 0.15
TPM2-204ENST00000378300 AXDND1Q5T1B0 1012 aaPredicted RBP16.02■□□□□ 0.15
TPM2-204ENST00000378300 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.15
TPM2-204ENST00000378300 NCAPG2Q86XI2 1143 aa16.02■□□□□ 0.15
TPM2-204ENST00000378300 ANKRD13CQ8N6S4 541 aa16.02■□□□□ 0.15
TPM2-204ENST00000378300 CCDC102AQ96A19 550 aa16.02■□□□□ 0.15
TPM2-204ENST00000378300 HHIPL1Q96JK4 782 aa16.02■□□□□ 0.15
TPM2-204ENST00000378300 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 268.8 ms