RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 DYNC1LI2O43237 492 aaPredicted RBP22.58■■□□□ 1.21
CBWD3-204ENST00000377349 CABYRO75952 493 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 NUCB1Q02818 461 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 ITGA7Q13683 1181 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 CCDC96Q2M329 555 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 IQSEC1Q6DN90 963 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 ZNF589Q86UQ0 364 aaPredicted RBP22.58■■□□□ 1.21
CBWD3-204ENST00000377349 USP38Q8NB14 1042 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 VTA1Q9NP79 307 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 TCP11L1Q9NUJ3 509 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 Q9Y3F1 56 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 KIAA1217Q5T5P2 1943 aa22.58■■□□□ 1.21
CBWD3-204ENST00000377349 NFIBO00712 420 aa22.57■■□□□ 1.2
CBWD3-204ENST00000377349 HAND2P61296 217 aa22.57■■□□□ 1.2
CBWD3-204ENST00000377349 PLEKHM2Q8IWE5 1019 aa22.57■■□□□ 1.2
CBWD3-204ENST00000377349 FRMPD2Q68DX3 1309 aaPredicted RBP22.57■■□□□ 1.2
CBWD3-204ENST00000377349 HSPD1P10809 573 aaKnown RBP22.57■■□□□ 1.2
CBWD3-204ENST00000377349 TOP1P11387 765 aaKnown RBP22.57■■□□□ 1.2
CBWD3-204ENST00000377349 ALDH5A1P51649 535 aaPredicted RBP22.57■■□□□ 1.2
CBWD3-204ENST00000377349 BAATQ14032 418 aaPredicted RBP22.57■■□□□ 1.2
CBWD3-204ENST00000377349 SYDE2Q5VT97 1194 aa22.57■■□□□ 1.2
CBWD3-204ENST00000377349 PSRC1Q6PGN9 363 aaPredicted RBP22.57■■□□□ 1.2
CBWD3-204ENST00000377349 VWCEQ96DN2 955 aa22.57■■□□□ 1.2
CBWD3-204ENST00000377349 AP5M1Q9H0R1 490 aa22.57■■□□□ 1.2
CBWD3-204ENST00000377349 IL23AQ9NPF7 189 aa22.57■■□□□ 1.2
CBWD3-204ENST00000377349 CXXC1Q9P0U4 656 aaPredicted RBP22.57■■□□□ 1.2
CBWD3-204ENST00000377349 TANC1Q9C0D5 1861 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 CCDC171Q6TFL3 1326 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 B4GALT4O60513 344 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 PDHBP11177 359 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 PSMC6P62333 389 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 CLEC4DQ8WXI8 215 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 HERVK_113Q902F9 699 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 NOC4LQ9BVI4 516 aaKnown RBP22.56■■□□□ 1.2
CBWD3-204ENST00000377349 TRPV6Q9H1D0 765 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 WNT8AQ9H1J5 351 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 HIPK3Q9H422 1215 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 DIAPH3Q9NSV4 1193 aa22.56■■□□□ 1.2
CBWD3-204ENST00000377349 DUSP28Q4G0W2 176 aa22.55■■□□□ 1.2
CBWD3-204ENST00000377349 CWC27Q6UX04 472 aaKnown RBP22.55■■□□□ 1.2
CBWD3-204ENST00000377349 SLC30A10Q6XR72 485 aa22.55■■□□□ 1.2
CBWD3-204ENST00000377349 TICAM2Q86XR7 235 aa22.55■■□□□ 1.2
CBWD3-204ENST00000377349 GPCPD1Q9NPB8 672 aa22.55■■□□□ 1.2
CBWD3-204ENST00000377349 RBM47A0AV96 593 aaKnown RBP22.54■■□□□ 1.2
CBWD3-204ENST00000377349 SDSP20132 328 aa22.54■■□□□ 1.2
CBWD3-204ENST00000377349 KIAA1211Q6ZU35 1233 aa22.54■■□□□ 1.2
CBWD3-204ENST00000377349 TBC1D10CQ8IV04 446 aa22.54■■□□□ 1.2
CBWD3-204ENST00000377349 XIRP2A4UGR9 3374 aa22.53■■□□□ 1.2
CBWD3-204ENST00000377349 SNHG28P0DPA3 235 aa22.53■■□□□ 1.2
CBWD3-204ENST00000377349 SEZ6LQ9BYH1 1024 aa22.53■■□□□ 1.2
CBWD3-204ENST00000377349 LOC102724159A0A0B4J2E5 919 aa22.52■■□□□ 1.2
CBWD3-204ENST00000377349 ZEB2O60315 1214 aa22.52■■□□□ 1.2
CBWD3-204ENST00000377349 MFAP1P55081 439 aaKnown RBP22.52■■□□□ 1.2
CBWD3-204ENST00000377349 CCL23P55773 120 aa22.52■■□□□ 1.2
CBWD3-204ENST00000377349 ZNF543Q08ER8 600 aa22.52■■□□□ 1.2
CBWD3-204ENST00000377349 PWP2Q15269 919 aaKnown RBP22.52■■□□□ 1.2
CBWD3-204ENST00000377349 ALDH8A1Q9H2A2 487 aaPredicted RBP22.52■■□□□ 1.2
CBWD3-204ENST00000377349 ADD3Q9UEY8 706 aaKnown RBP22.52■■□□□ 1.2
CBWD3-204ENST00000377349 MYH7BA7E2Y1 1941 aa22.52■■□□□ 1.2
CBWD3-204ENST00000377349 PTPRSQ13332 1948 aa22.51■■□□□ 1.19
CBWD3-204ENST00000377349 PRRC2BQ5JSZ5 2229 aaKnown RBP22.51■■□□□ 1.19
CBWD3-204ENST00000377349 PURAQ00577 322 aaKnown RBP22.51■■□□□ 1.19
CBWD3-204ENST00000377349 AKNAD1Q5T1N1 836 aa22.51■■□□□ 1.19
CBWD3-204ENST00000377349 WDR11Q9BZH6 1224 aa22.51■■□□□ 1.19
CBWD3-204ENST00000377349 PTPDC1A2A3K4 754 aa22.5■■□□□ 1.19
CBWD3-204ENST00000377349 FGBP02675 491 aa22.5■■□□□ 1.19
CBWD3-204ENST00000377349 EDNRBP24530 442 aa22.5■■□□□ 1.19
CBWD3-204ENST00000377349 PRDM12Q9H4Q4 367 aa22.5■■□□□ 1.19
CBWD3-204ENST00000377349 YBX2Q9Y2T7 364 aaKnown RBP22.5■■□□□ 1.19
CBWD3-204ENST00000377349 NEDD4P46934 1319 aa22.5■■□□□ 1.19
CBWD3-204ENST00000377349 WDR19Q8NEZ3 1342 aa22.5■■□□□ 1.19
CBWD3-204ENST00000377349 RPS6P62753 249 aaKnown RBP22.49■■□□□ 1.19
CBWD3-204ENST00000377349 ADGRE1Q14246 886 aa22.49■■□□□ 1.19
CBWD3-204ENST00000377349 RNF207Q6ZRF8 634 aa22.49■■□□□ 1.19
CBWD3-204ENST00000377349 MFSD6Q6ZSS7 791 aa22.49■■□□□ 1.19
CBWD3-204ENST00000377349 OTOP2Q7RTS6 562 aa22.49■■□□□ 1.19
CBWD3-204ENST00000377349 TTC14Q96N46 770 aa22.49■■□□□ 1.19
CBWD3-204ENST00000377349 OSBPL3Q9H4L5 887 aa22.49■■□□□ 1.19
CBWD3-204ENST00000377349 PRDM6Q9NQX0 595 aa22.49■■□□□ 1.19
CBWD3-204ENST00000377349 TRMT13Q9NUP7 481 aaKnown RBP22.49■■□□□ 1.19
CBWD3-204ENST00000377349 PCP11498 1178 aaKnown RBP22.48■■□□□ 1.19
CBWD3-204ENST00000377349 CALML3P27482 149 aa22.48■■□□□ 1.19
CBWD3-204ENST00000377349 SCLYQ96I15 445 aa22.48■■□□□ 1.19
CBWD3-204ENST00000377349 BDP1A6H8Y1 2624 aa22.48■■□□□ 1.19
CBWD3-204ENST00000377349 RAB30Q15771 203 aa22.48■■□□□ 1.19
CBWD3-204ENST00000377349 NKX2-4Q9H2Z4 354 aa22.48■■□□□ 1.19
CBWD3-204ENST00000377349 CPVLQ9H3G5 476 aa22.48■■□□□ 1.19
CBWD3-204ENST00000377349 POLR3EQ9NVU0 708 aa22.48■■□□□ 1.19
CBWD3-204ENST00000377349 BAZ2BQ9UIF8 2168 aaKnown RBP22.47■■□□□ 1.19
CBWD3-204ENST00000377349 HIP1O00291 1037 aa22.47■■□□□ 1.19
CBWD3-204ENST00000377349 CYP2C9P11712 490 aa22.47■■□□□ 1.19
CBWD3-204ENST00000377349 COPS5Q92905 334 aa22.47■■□□□ 1.19
CBWD3-204ENST00000377349 TNKSO95271 1327 aa22.46■■□□□ 1.19
CBWD3-204ENST00000377349 ZNF213O14771 459 aa22.46■■□□□ 1.19
CBWD3-204ENST00000377349 GOLGA8HP0CJ92 632 aa22.46■■□□□ 1.19
CBWD3-204ENST00000377349 CPT1AP50416 773 aa22.46■■□□□ 1.19
CBWD3-204ENST00000377349 OR6J1Q8NGC5 347 aa22.46■■□□□ 1.19
CBWD3-204ENST00000377349 GAS2L1Q99501 681 aaPredicted RBP22.46■■□□□ 1.19
CBWD3-204ENST00000377349 ZKSCAN3Q9BRR0 538 aa22.46■■□□□ 1.19
CBWD3-204ENST00000377349 MTIF3Q9H2K0 278 aaKnown RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms