RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RAB34Q9BZG1 259 aa22.71■■□□□ 1.23
VSX1-202ENST00000376709 TPM1P09493 284 aa22.7■■□□□ 1.23
VSX1-202ENST00000376709 COPB1P53618 953 aaKnown RBP22.7■■□□□ 1.23
VSX1-202ENST00000376709 ASIC1P78348 528 aa22.7■■□□□ 1.23
VSX1-202ENST00000376709 NAA30Q147X3 362 aaPredicted RBP22.7■■□□□ 1.23
VSX1-202ENST00000376709 SYCP1Q15431 976 aa22.7■■□□□ 1.23
VSX1-202ENST00000376709 SHROOM1Q2M3G4 852 aaPredicted RBP22.7■■□□□ 1.23
VSX1-202ENST00000376709 CCDC93Q567U6 631 aa22.7■■□□□ 1.23
VSX1-202ENST00000376709 REXO1L1PQ8IX06 675 aa22.7■■□□□ 1.23
VSX1-202ENST00000376709 MMTAG2Q9BU76 263 aaKnown RBP22.7■■□□□ 1.23
VSX1-202ENST00000376709 TDRD3Q9H7E2 651 aaKnown RBP22.7■■□□□ 1.23
VSX1-202ENST00000376709 EXOC1Q9NV70 894 aa22.7■■□□□ 1.23
VSX1-202ENST00000376709 TAB2Q9NYJ8 693 aa22.7■■□□□ 1.23
VSX1-202ENST00000376709 DPEP1P16444 411 aa22.7■■□□□ 1.22
VSX1-202ENST00000376709 FXR2P51116 673 aaKnown RBP eCLIP22.7■■□□□ 1.22
VSX1-202ENST00000376709 CDK5RAP3Q96JB5 506 aa22.7■■□□□ 1.22
VSX1-202ENST00000376709 PSTPIP2Q9H939 334 aa22.7■■□□□ 1.22
VSX1-202ENST00000376709 ITIH6Q6UXX5 1313 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 PDE4DQ08499 809 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 TOGARAM2Q6ZUX3 1019 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 MTMR8Q96EF0 704 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 NYAP2Q9P242 653 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 DNAI1Q9UI46 699 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 GOLGA6L9A6NEM1 432 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 NPM3O75607 178 aaKnown RBP22.69■■□□□ 1.22
VSX1-202ENST00000376709 CASP14P31944 242 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 CLK2P49760 499 aaKnown RBP22.69■■□□□ 1.22
VSX1-202ENST00000376709 ICA1Q05084 483 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 CNGA4Q8IV77 575 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 DCAF4Q8WV16 495 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 MKL1Q969V6 931 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 TRIM47Q96LD4 638 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 C7orf25Q9BPX7 421 aa22.69■■□□□ 1.22
VSX1-202ENST00000376709 ZNF215Q9UL58 517 aaPredicted RBP22.69■■□□□ 1.22
VSX1-202ENST00000376709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.69■■□□□ 1.22
VSX1-202ENST00000376709 PHLPP2Q6ZVD8 1323 aa22.68■■□□□ 1.22
VSX1-202ENST00000376709 MFAP3LO75121 409 aa22.68■■□□□ 1.22
VSX1-202ENST00000376709 KCNA3P22001 575 aa22.68■■□□□ 1.22
VSX1-202ENST00000376709 PMS1P54277 932 aaKnown RBP22.68■■□□□ 1.22
VSX1-202ENST00000376709 SEPT2Q15019 361 aa22.68■■□□□ 1.22
VSX1-202ENST00000376709 SLFN13Q68D06 897 aa22.68■■□□□ 1.22
VSX1-202ENST00000376709 NAA15Q9BXJ9 866 aaKnown RBP22.68■■□□□ 1.22
VSX1-202ENST00000376709 POTEMA6NI47 508 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 EDIL3O43854 480 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 PPP4R3AQ6IN85 833 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 TATDN1Q6P1N9 297 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 TMEM179Q6ZVK1 233 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 PDCL2Q8N4E4 241 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 ZNF277Q9NRM2 450 aaPredicted RBP22.67■■□□□ 1.22
VSX1-202ENST00000376709 DDX25Q9UHL0 483 aaKnown RBP22.67■■□□□ 1.22
VSX1-202ENST00000376709 MYH7BA7E2Y1 1941 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 RAD17O75943 681 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 GYPCP04921 128 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 QRICH1Q2TAL8 776 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 TRIM65Q6PJ69 517 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 SV2BQ7L1I2 683 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 RTKN2Q8IZC4 609 aa22.67■■□□□ 1.22
VSX1-202ENST00000376709 DHTKD1Q96HY7 919 aaPredicted RBP22.67■■□□□ 1.22
VSX1-202ENST00000376709 PRMT6Q96LA8 375 aaPredicted RBP22.67■■□□□ 1.22
VSX1-202ENST00000376709 SOWAHDA6NJG2 315 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 MARCH6O60337 910 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 GDF11O95390 407 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 SLU7O95391 586 aaKnown RBP22.66■■□□□ 1.22
VSX1-202ENST00000376709 GRB10Q13322 594 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 PDIA5Q14554 519 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 ABCB5Q2M3G0 1257 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 DESI2Q9BSY9 194 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 THAP9Q9H5L6 903 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 STK17AQ9UEE5 414 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 PCDHA1Q9Y5I3 950 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 UBXN1Q04323 297 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 KRT79Q5XKE5 535 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 IRF2BP1Q8IU81 584 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 LARGE2Q8N3Y3 721 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 SRRTQ9BXP5 876 aaKnown RBP22.66■■□□□ 1.22
VSX1-202ENST00000376709 GTPBP4Q9BZE4 634 aaKnown RBP22.66■■□□□ 1.22
VSX1-202ENST00000376709 GLT8D2Q9H1C3 349 aa22.66■■□□□ 1.22
VSX1-202ENST00000376709 MAGEC2Q9UBF1 373 aaPredicted RBP22.66■■□□□ 1.22
VSX1-202ENST00000376709 EEF1GP26641 437 aaKnown RBP22.65■■□□□ 1.22
VSX1-202ENST00000376709 FXR1P51114 621 aaKnown RBP eCLIP22.65■■□□□ 1.22
VSX1-202ENST00000376709 CDC37Q16543 378 aaPredicted RBP22.65■■□□□ 1.22
VSX1-202ENST00000376709 SNX29Q8TEQ0 813 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 LARP4BQ92615 738 aaKnown RBP22.65■■□□□ 1.22
VSX1-202ENST00000376709 CCDC51Q96ER9 411 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 ERO1AQ96HE7 468 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 PSMD1Q99460 953 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 L2HGDHQ9H9P8 463 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 COL4A5P29400 1685 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 BICDL2A1A5D9 508 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 PES1O00541 588 aaKnown RBP22.65■■□□□ 1.22
VSX1-202ENST00000376709 CCDC175P0C221 793 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 STK4Q13043 487 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 TRIM14Q14142 442 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 MTF1Q14872 753 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 TTI2Q6NXR4 508 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 CNNM4Q6P4Q7 775 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 CSGALNACT2Q8N6G5 542 aa22.65■■□□□ 1.22
VSX1-202ENST00000376709 NUP88Q99567 741 aaPredicted RBP22.65■■□□□ 1.22
VSX1-202ENST00000376709 CCDC94Q9BW85 323 aaPredicted RBP22.65■■□□□ 1.22
VSX1-202ENST00000376709 PSMD14O00487 310 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms