RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CLTAP09496 248 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 MAP7D1Q3KQU3 841 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-203ENST00000375274 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-203ENST00000375274 MOCS3O95396 460 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 ZNF579Q8NAF0 562 aaKnown RBP12.64□□□□□ -0.39
PTCH1-203ENST00000375274 TTLL11Q8NHH1 800 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
PTCH1-203ENST00000375274 GDAQ9Y2T3 454 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 PCDHA1Q9Y5I3 950 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 HIP1RO75146 1068 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 CD19P15391 556 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 BTDP43251 543 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 NSMFQ6X4W1 530 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 DHX40Q8IX18 779 aaKnown RBP12.64□□□□□ -0.39
PTCH1-203ENST00000375274 NDST4Q9H3R1 872 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 FTCDO95954 541 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 KIF11P52732 1056 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 IQCB1Q15051 598 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 INTS9Q9NV88 658 aaKnown RBP12.64□□□□□ -0.39
PTCH1-203ENST00000375274 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
PTCH1-203ENST00000375274 CYP2D7A0A087X1C5 515 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 MYO1CO00159 1063 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 PGRMC1O00264 195 aaKnown RBP12.63□□□□□ -0.39
PTCH1-203ENST00000375274 TNNI1P19237 187 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 CASP1P29466 404 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 SLC8A1P32418 973 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 ADCY8P40145 1251 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 TBC1D10CQ8IV04 446 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 PPM1KQ8N3J5 372 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 MAGOHBQ96A72 148 aaKnown RBP12.63□□□□□ -0.39
PTCH1-203ENST00000375274 CCDC97Q96F63 343 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-203ENST00000375274 PSMD1Q99460 953 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 ATP10DQ9P241 1426 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 PLCG1P19174 1290 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 IFNAR2P48551 515 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 NNTQ13423 1086 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 MB21D2Q8IYB1 491 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-203ENST00000375274 RNF10Q8N5U6 811 aaKnown RBP12.63□□□□□ -0.39
PTCH1-203ENST00000375274 DISC1Q9NRI5 854 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 DAAM1Q9Y4D1 1078 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 RFX7Q2KHR2 1363 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 ARL1P40616 181 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-203ENST00000375274 PSMC4P43686 418 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 PABPC4Q13310 644 aaKnown RBP eCLIP12.63□□□□□ -0.39
PTCH1-203ENST00000375274 LGSNQ5TDP6 509 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 TEKT1Q969V4 418 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 KIFC2Q96AC6 838 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 RUNDC3BQ96NL0 473 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 FAM114A2Q9NRY5 505 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 EMBQ6PCB8 327 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 P3H4Q92791 437 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 ABHD10Q9NUJ1 306 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 ADGRG1Q9Y653 693 aa12.63□□□□□ -0.39
PTCH1-203ENST00000375274 LOC102724428A0A0B4J2F2 783 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 THAP12O43422 761 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 N4BP1O75113 896 aaKnown RBP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 TROVE2P10155 538 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 SIK1P57059 783 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 CARD10Q9BWT7 1032 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 ZCCHC11Q5TAX3 1644 aaKnown RBP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 LAMC1P11047 1609 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 DDIT3P35638 169 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 SLC7A5Q01650 507 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 ALS2CLQ60I27 953 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 FBXO11Q86XK2 927 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 PCDHA13Q9Y5I0 950 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 ABCC3O15438 1527 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 PLEKHA8P1O95397 391 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 MIER3Q7Z3K6 550 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 SDCCAG8Q86SQ7 713 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 ZNF354CQ86Y25 554 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 GRK7Q8WTQ7 553 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 CHURC1Q8WUH1 139 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 MYCBPQ99417 103 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 ATP8A1Q9Y2Q0 1164 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 WDR19Q8NEZ3 1342 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 PASKQ96RG2 1323 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 LMNB1P20700 586 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 GPATCH4Q5T3I0 446 aaKnown RBP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 CYB5R4Q7L1T6 521 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 CCDC89Q8N998 374 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 FAM133AQ8N9E0 248 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 TYW1Q9NV66 732 aaKnown RBP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 CPSF2Q9P2I0 782 aaKnown RBP12.62□□□□□ -0.39
PTCH1-203ENST00000375274 ANAPC4Q9UJX5 808 aa12.62□□□□□ -0.39
PTCH1-203ENST00000375274 MADDQ8WXG6 1647 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 I3L4J1 428 aa12.61□□□□□ -0.39
PTCH1-203ENST00000375274 NDC80O14777 642 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms