RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 STAT2P52630 851 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 GSDMDP57764 484 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 TRAF1Q13077 416 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 DHX8Q14562 1220 aaKnown RBP20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 MOXD1Q6UVY6 613 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 RASSF8Q8NHQ8 419 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 STAMQ92783 540 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 MED15Q96RN5 788 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 RAB34Q9BZG1 259 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 BLZF1Q9H2G9 400 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 PRR12Q9ULL5 1215 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 NFE2L3Q9Y4A8 694 aa20.3■□□□□ 0.84
HLA-DQB1-201ENST00000374943 PPP1R3GB7ZBB8 358 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 MEIS2O14770 477 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 ASNSP08243 561 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 CD44P16070 742 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 PLCG1P19174 1290 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 TECP42680 631 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP11P51784 963 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 IKQ13123 557 aaPredicted RBP20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 KCNB1Q14721 858 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 MBOAT7Q96N66 472 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 MMTAG2Q9BU76 263 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 ANO3Q9BYT9 981 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 VCPKMTQ9H867 229 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 DDX25Q9UHL0 483 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 PYCARDQ9ULZ3 195 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 CYP3A7-CYP3A51PA0A087WV96 503 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 CYP3A7P24462 503 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 KIAA1755Q5JYT7 1200 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 ZNF658Q5TYW1 1059 aaPredicted RBP20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 CACTINQ8WUQ7 758 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 CRYGNQ8WXF5 182 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 TEPSINQ96N21 525 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 GINM1Q9NU53 330 aa20.29■□□□□ 0.84
HLA-DQB1-201ENST00000374943 SYNRGQ9UMZ2 1314 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L15C9J2P7 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L13C9JLJ4 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L11C9JVI0 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L18D6R9N7 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L22D6RA61 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L17D6RBQ6 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L19D6RCP7 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L20D6RJB6 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 FOSP01100 380 aaPredicted RBP20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 TXKP42681 527 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 UBASH3AP57075 661 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 RASSF7Q02833 373 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L24Q0WX57 530 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 RASA3Q14644 834 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 SPATA1Q5VX52 437 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 USP17L6PQ6QN14 398 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 MIGA2Q7L4E1 593 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 LRRC8AQ8IWT6 810 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 LRRC15Q8TF66 581 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 CALML4Q96GE6 196 aa20.28■□□□□ 0.84
HLA-DQB1-201ENST00000374943 SBF1O95248 1867 aa20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 PHF20L1A8MW92 1017 aa20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 SERPINC1P01008 464 aa20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 GMPSP49915 693 aaPredicted RBP20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 NOLC1Q14978 699 aaKnown RBP eCLIP20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 TRMT44Q8IYL2 757 aaKnown RBP20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 STK17AQ9UEE5 414 aa20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 LRWD1Q9UFC0 647 aa20.27■□□□□ 0.84
HLA-DQB1-201ENST00000374943 RBBP6Q7Z6E9 1792 aaKnown RBP20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 PIK3CDO00329 1044 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 KLRC4O43908 158 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 PRELPP51888 382 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 LRMPQ12912 555 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 FAM83BQ5T0W9 1011 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 FAM160B2Q86V87 743 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 MICALL2Q8IY33 904 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 CHURC1Q8WUH1 139 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 HAS1Q92839 578 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 RANBP17Q9H2T7 1088 aaKnown RBP20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 PARP14Q460N5 1801 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 SLC26A4O43511 780 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 EGFRP00533 1210 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 FILIP1Q7Z7B0 1213 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 CCDC150Q8NCX0 1101 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 C7orf25Q9BPX7 421 aa20.26■□□□□ 0.83
HLA-DQB1-201ENST00000374943 OPLAHO14841 1288 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 RHOBTB3O94955 611 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 SNAP25P60880 206 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 GRB10Q13322 594 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 CDKAL1Q5VV42 579 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 TMC6Q7Z403 805 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 GTPBP4Q9BZE4 634 aaKnown RBP20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 KCNMB3Q9NPA1 279 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 RWDD2AQ9UIY3 292 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 FEM1BQ9UK73 627 aa20.25■□□□□ 0.83
HLA-DQB1-201ENST00000374943 SREBF1P36956 1147 aa20.24■□□□□ 0.83
HLA-DQB1-201ENST00000374943 AMPD3Q01432 767 aa20.24■□□□□ 0.83
HLA-DQB1-201ENST00000374943 USH1GQ495M9 461 aa20.24■□□□□ 0.83
HLA-DQB1-201ENST00000374943 VSTM4Q8IW00 320 aa20.24■□□□□ 0.83
HLA-DQB1-201ENST00000374943 SMYD4Q8IYR2 804 aaPredicted RBP20.24■□□□□ 0.83
HLA-DQB1-201ENST00000374943 PNMA5Q96PV4 448 aa20.24■□□□□ 0.83
HLA-DQB1-201ENST00000374943 TRIM9Q9C026 710 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms