RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SARSP49591 514 aaKnown RBP8.8□□□□□ -1
USP48-203ENST00000374732 CCT8P50990 548 aa8.8□□□□□ -1
USP48-203ENST00000374732 GBE1Q04446 702 aa8.8□□□□□ -1
USP48-203ENST00000374732 PPIDQ08752 370 aaKnown RBP8.8□□□□□ -1
USP48-203ENST00000374732 ANKRD1Q15327 319 aa8.8□□□□□ -1
USP48-203ENST00000374732 LRRFIP1Q32MZ4 808 aaKnown RBP8.8□□□□□ -1
USP48-203ENST00000374732 BTNL9Q6UXG8 535 aa8.8□□□□□ -1
USP48-203ENST00000374732 RAB11FIP4Q86YS3 637 aa8.8□□□□□ -1
USP48-203ENST00000374732 LURAP1LQ8IV03 231 aa8.8□□□□□ -1
USP48-203ENST00000374732 FERD3LQ96RJ6 166 aa8.8□□□□□ -1
USP48-203ENST00000374732 EIF3CQ99613 913 aaKnown RBP8.8□□□□□ -1
USP48-203ENST00000374732 TEX13BQ9BXU2 312 aa8.8□□□□□ -1
USP48-203ENST00000374732 STARD7Q9NQZ5 370 aa8.8□□□□□ -1
USP48-203ENST00000374732 TUBGCP4Q9UGJ1 667 aa8.8□□□□□ -1
USP48-203ENST00000374732 GTF2A1LQ9UNN4 478 aa8.8□□□□□ -1
USP48-203ENST00000374732 hCG_1642624A0A1W2PR95 340 aa8.8□□□□□ -1
USP48-203ENST00000374732 ACSL4O60488 711 aa8.8□□□□□ -1
USP48-203ENST00000374732 PLCB4Q15147 1175 aa8.8□□□□□ -1
USP48-203ENST00000374732 TTF1Q15361 905 aaPredicted RBP8.8□□□□□ -1
USP48-203ENST00000374732 PUM3Q15397 648 aaKnown RBP8.8□□□□□ -1
USP48-203ENST00000374732 TBC1D9Q6ZT07 1266 aa8.8□□□□□ -1
USP48-203ENST00000374732 DZIP1LQ8IYY4 767 aaKnown RBP8.8□□□□□ -1
USP48-203ENST00000374732 TCP11L2Q8N4U5 519 aa8.8□□□□□ -1
USP48-203ENST00000374732 OR8H1Q8NGG4 311 aa8.8□□□□□ -1
USP48-203ENST00000374732 TEKT4Q8WW24 435 aa8.8□□□□□ -1
USP48-203ENST00000374732 CFAP36Q96G28 342 aa8.8□□□□□ -1
USP48-203ENST00000374732 CDK19Q9BWU1 502 aa8.8□□□□□ -1
USP48-203ENST00000374732 CSRNP2Q9H175 543 aa8.8□□□□□ -1
USP48-203ENST00000374732 RNF19AQ9NV58 838 aa8.8□□□□□ -1
USP48-203ENST00000374732 ABCC6O95255 1503 aa8.8□□□□□ -1
USP48-203ENST00000374732 ANKARQ7Z5J8 1434 aa8.8□□□□□ -1
USP48-203ENST00000374732 SCAMP3O14828 347 aaKnown RBP8.8□□□□□ -1
USP48-203ENST00000374732 FYB1O15117 783 aa8.8□□□□□ -1
USP48-203ENST00000374732 SGSM2O43147 1006 aa8.8□□□□□ -1
USP48-203ENST00000374732 SKAP2O75563 359 aaPredicted RBP8.8□□□□□ -1
USP48-203ENST00000374732 YY1P25490 414 aa8.8□□□□□ -1
USP48-203ENST00000374732 MCM5P33992 734 aa8.8□□□□□ -1
USP48-203ENST00000374732 SKOR1P84550 965 aa8.8□□□□□ -1
USP48-203ENST00000374732 KLHL30Q0D2K2 578 aa8.8□□□□□ -1
USP48-203ENST00000374732 GPATCH4Q5T3I0 446 aaKnown RBP8.8□□□□□ -1
USP48-203ENST00000374732 FAM180BQ6P0A1 224 aa8.8□□□□□ -1
USP48-203ENST00000374732 COLGALT2Q8IYK4 626 aa8.8□□□□□ -1
USP48-203ENST00000374732 AADATQ8N5Z0 425 aa8.8□□□□□ -1
USP48-203ENST00000374732 SPERTQ8NA61 448 aa8.8□□□□□ -1
USP48-203ENST00000374732 LPIN2Q92539 896 aa8.8□□□□□ -1
USP48-203ENST00000374732 MAML1Q92585 1016 aa8.8□□□□□ -1
USP48-203ENST00000374732 TIFAQ96CG3 184 aa8.8□□□□□ -1
USP48-203ENST00000374732 KATNAL1Q9BW62 490 aa8.8□□□□□ -1
USP48-203ENST00000374732 ZNF510Q9Y2H8 683 aa8.8□□□□□ -1
USP48-203ENST00000374732 ZKSCAN5Q9Y2L8 839 aa8.8□□□□□ -1
USP48-203ENST00000374732 TMEM221A6NGB7 291 aa8.79□□□□□ -1
USP48-203ENST00000374732 GNAT3A8MTJ3 354 aa8.79□□□□□ -1
USP48-203ENST00000374732 PBLDP30039 288 aaPredicted RBP8.79□□□□□ -1
USP48-203ENST00000374732 KRT20P35900 424 aa8.79□□□□□ -1
USP48-203ENST00000374732 CD86P42081 329 aa8.79□□□□□ -1
USP48-203ENST00000374732 RBL2Q08999 1139 aa8.79□□□□□ -1
USP48-203ENST00000374732 SHQ1Q6PI26 577 aaKnown RBP8.79□□□□□ -1
USP48-203ENST00000374732 POTEEQ6S8J3 1075 aa8.79□□□□□ -1
USP48-203ENST00000374732 SH3BP5LQ7L8J4 393 aa8.79□□□□□ -1
USP48-203ENST00000374732 SYCP3Q8IZU3 236 aa8.79□□□□□ -1
USP48-203ENST00000374732 CTAGE1Q96RT6 745 aa8.79□□□□□ -1
USP48-203ENST00000374732 TYW1Q9NV66 732 aaKnown RBP8.79□□□□□ -1
USP48-203ENST00000374732 DDX18Q9NVP1 670 aaKnown RBP8.79□□□□□ -1
USP48-203ENST00000374732 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.79□□□□□ -1
USP48-203ENST00000374732 DKK3Q9UBP4 350 aa8.79□□□□□ -1
USP48-203ENST00000374732 SOWAHDA6NJG2 315 aa8.79□□□□□ -1
USP48-203ENST00000374732 NOS2P35228 1153 aa8.79□□□□□ -1
USP48-203ENST00000374732 LAMC2Q13753 1193 aa8.79□□□□□ -1
USP48-203ENST00000374732 C20orf194Q5TEA3 1177 aa8.79□□□□□ -1
USP48-203ENST00000374732 CEP135Q66GS9 1140 aa8.79□□□□□ -1
USP48-203ENST00000374732 PPFIBP1Q86W92 1011 aa8.79□□□□□ -1
USP48-203ENST00000374732 CCDC150Q8NCX0 1101 aa8.79□□□□□ -1
USP48-203ENST00000374732 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.79□□□□□ -1
USP48-203ENST00000374732 NTPCRQ9BSD7 190 aaKnown RBP8.79□□□□□ -1
USP48-203ENST00000374732 POLR3EQ9NVU0 708 aa8.79□□□□□ -1
USP48-203ENST00000374732 CRYBG1Q9Y4K1 1723 aa8.79□□□□□ -1
USP48-203ENST00000374732 PXDNQ92626 1479 aa8.78□□□□□ -1
USP48-203ENST00000374732 A0A1B0GUA9 196 aa8.78□□□□□ -1
USP48-203ENST00000374732 CCDC85CA6NKD9 419 aa8.78□□□□□ -1
USP48-203ENST00000374732 NDC80O14777 642 aa8.78□□□□□ -1
USP48-203ENST00000374732 PDE6CP51160 858 aa8.78□□□□□ -1
USP48-203ENST00000374732 MTX1Q13505 466 aa8.78□□□□□ -1
USP48-203ENST00000374732 CAPN12Q6ZSI9 719 aa8.78□□□□□ -1
USP48-203ENST00000374732 SPATA5Q8NB90 893 aa8.78□□□□□ -1
USP48-203ENST00000374732 TMEM87AQ8NBN3 555 aa8.78□□□□□ -1
USP48-203ENST00000374732 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
USP48-203ENST00000374732 STK32AQ8WU08 396 aa8.78□□□□□ -1
USP48-203ENST00000374732 CNDP1Q96KN2 507 aa8.78□□□□□ -1
USP48-203ENST00000374732 JPH2Q9BR39 696 aaPredicted RBP8.78□□□□□ -1
USP48-203ENST00000374732 FOXP3Q9BZS1 431 aa8.78□□□□□ -1
USP48-203ENST00000374732 CLSTN2Q9H4D0 955 aa8.78□□□□□ -1
USP48-203ENST00000374732 ATP8A2Q9NTI2 1148 aa8.78□□□□□ -1
USP48-203ENST00000374732 VTI1BQ9UEU0 232 aa8.78□□□□□ -1
USP48-203ENST00000374732 CCPG1Q9ULG6 757 aa8.78□□□□□ -1
USP48-203ENST00000374732 TTLL3Q9Y4R7 772 aa8.78□□□□□ -1
USP48-203ENST00000374732 CPSF1Q10570 1443 aaKnown RBP8.78□□□□□ -1
USP48-203ENST00000374732 SOS2Q07890 1332 aaPredicted RBP8.78□□□□□ -1
USP48-203ENST00000374732 MINK1Q8N4C8 1332 aaPredicted RBP8.78□□□□□ -1
USP48-203ENST00000374732 GNPATO15228 680 aa8.78□□□□□ -1
USP48-203ENST00000374732 NCAM2O15394 837 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms