RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 EPB41L5Q9HCM4 733 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 ZNHIT6Q9NWK9 470 aaKnown RBP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.31□□□□□ -0.12
PRPF4-201ENST00000374198 RGPD2P0DJD1 1756 aa14.31□□□□□ -0.12
PRPF4-201ENST00000374198 PES1O00541 588 aaKnown RBP14.3□□□□□ -0.12
PRPF4-201ENST00000374198 GKAP1Q5VSY0 366 aaPredicted RBP14.3□□□□□ -0.12
PRPF4-201ENST00000374198 SLC26A6Q9BXS9 759 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 IRAK4Q9NWZ3 460 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 PLAAQ9Y263 795 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 LGALS16A8MUM7 142 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 SSRP1Q08945 709 aaKnown RBP14.3□□□□□ -0.12
PRPF4-201ENST00000374198 SNX1Q13596 522 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 ZC3H12AQ5D1E8 599 aaKnown RBP14.3□□□□□ -0.12
PRPF4-201ENST00000374198 THEMIS2Q5TEJ8 643 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 NELFBQ8WX92 580 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 ZNF570Q96NI8 536 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 PSMB7Q99436 277 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 FOXP1Q9H334 677 aaPredicted RBP14.3□□□□□ -0.12
PRPF4-201ENST00000374198 DDX21Q9NR30 783 aaKnown RBP eCLIP14.3□□□□□ -0.12
PRPF4-201ENST00000374198 FAM217BQ9NTX9 383 aaPredicted RBP14.3□□□□□ -0.12
PRPF4-201ENST00000374198 LRWD1Q9UFC0 647 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 IQSEC3Q9UPP2 1182 aaPredicted RBP14.3□□□□□ -0.12
PRPF4-201ENST00000374198 TNS2Q63HR2 1409 aa14.3□□□□□ -0.12
PRPF4-201ENST00000374198 ESYT3A0FGR9 886 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 ZBTB43O43298 467 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 IFIT1P09914 478 aaKnown RBP14.29□□□□□ -0.12
PRPF4-201ENST00000374198 GUCY2DQ02846 1103 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 CCDC96Q2M329 555 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 RABL6Q3YEC7 729 aaPredicted RBP14.29□□□□□ -0.12
PRPF4-201ENST00000374198 ZNF507Q8TCN5 953 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 WHAMMQ8TF30 809 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 NUCKS1Q9H1E3 243 aaKnown RBP14.29□□□□□ -0.12
PRPF4-201ENST00000374198 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 KCNJ14Q9UNX9 436 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 L3MBTL1Q9Y468 752 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 ZSCAN5CA6NGD5 496 aaPredicted RBP14.29□□□□□ -0.12
PRPF4-201ENST00000374198 HEXIM1O94992 359 aaKnown RBP14.29□□□□□ -0.12
PRPF4-201ENST00000374198 PARP1P09874 1014 aaKnown RBP14.29□□□□□ -0.12
PRPF4-201ENST00000374198 TMOD1P28289 359 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 TIMM10P62072 90 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 SLC5A9Q2M3M2 681 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 CYB5R4Q7L1T6 521 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 L3MBTL3Q96JM7 780 aaPredicted RBP14.29□□□□□ -0.12
PRPF4-201ENST00000374198 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 AGPAT5Q9NUQ2 364 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 VPS54Q9P1Q0 977 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 DENND2AQ9ULE3 1009 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 HEG1Q9ULI3 1381 aa14.29□□□□□ -0.12
PRPF4-201ENST00000374198 GOLGA8AA7E2F4 631 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 GCOM1H8Y6P7 765 aaPredicted RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 LIN7AO14910 233 aaPredicted RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 USO1O60763 962 aaKnown RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 APBA3O96018 575 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 MYZAPP0CAP1 466 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 TATP17735 454 aaPredicted RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 PPARDQ03181 441 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 LRIG3Q6UXM1 1119 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 IRF2BP1Q8IU81 584 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 CCDC63Q8NA47 563 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 WASF1Q92558 559 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 RAPGEF5Q92565 580 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 MYD88Q99836 296 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 YIPF3Q9GZM5 350 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 MLXIPQ9HAP2 919 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 NOP53Q9NZM5 478 aaKnown RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 H7C1W4 665 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 BACH1O14867 736 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 ZNF263O14978 683 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 CAND2O75155 1236 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 MOCS3O95396 460 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 FMNL1O95466 1100 aaPredicted RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 FESP07332 822 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 PAEPP09466 180 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 CDC25CP30307 473 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 PDE6BP35913 854 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 HSPA9P38646 679 aaKnown RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 SPA17Q15506 151 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 PDCD2Q16342 344 aaPredicted RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 SYMPKQ92797 1274 aaKnown RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 PLCB1Q9NQ66 1216 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 CCT8L1PA6NM43 557 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 H7C1D1 291 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 AHCYL1O43865 530 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 CLTAP09496 248 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 PDIA6Q15084 440 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 CPLX4Q7Z7G2 160 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 NKX2-3Q8TAU0 364 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 STAMQ92783 540 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 TTYH3Q9C0H2 523 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 TAF1DQ9H5J8 278 aaPredicted RBP14.28□□□□□ -0.12
PRPF4-201ENST00000374198 TBC1D2BQ9UPU7 963 aa14.28□□□□□ -0.12
PRPF4-201ENST00000374198 ECM29Q5VYK3 1845 aa14.27□□□□□ -0.12
PRPF4-201ENST00000374198 GUCY1A2P33402 732 aa14.27□□□□□ -0.12
PRPF4-201ENST00000374198 EN1Q05925 392 aaPredicted RBP14.27□□□□□ -0.12
PRPF4-201ENST00000374198 NR5A1Q13285 461 aa14.27□□□□□ -0.12
PRPF4-201ENST00000374198 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.12
PRPF4-201ENST00000374198 ZCRB1Q8TBF4 217 aaKnown RBP14.27□□□□□ -0.12
PRPF4-201ENST00000374198 CASKIN2Q8WXE0 1202 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms