RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 STK3Q13188 491 aa21.21■□□□□ 0.99
PBX3-205ENST00000373492 MUM1L1Q5H9M0 696 aa21.21■□□□□ 0.99
PBX3-205ENST00000373492 LHX8Q68G74 356 aa21.21■□□□□ 0.99
PBX3-205ENST00000373492 MAMDC4Q6UXC1 1216 aa21.21■□□□□ 0.99
PBX3-205ENST00000373492 SLKQ9H2G2 1235 aaPredicted RBP21.21■□□□□ 0.99
PBX3-205ENST00000373492 A1CFQ9NQ94 594 aaKnown RBP21.21■□□□□ 0.99
PBX3-205ENST00000373492 FAM217BQ9NTX9 383 aaPredicted RBP21.21■□□□□ 0.99
PBX3-205ENST00000373492 MRPL11Q9Y3B7 192 aaKnown RBP21.21■□□□□ 0.99
PBX3-205ENST00000373492 CNTNAP5Q8WYK1 1306 aa21.21■□□□□ 0.99
PBX3-205ENST00000373492 CPLX1O14810 134 aa21.2■□□□□ 0.98
PBX3-205ENST00000373492 FARP2O94887 1054 aaPredicted RBP21.2■□□□□ 0.98
PBX3-205ENST00000373492 CNGA1P29973 690 aa21.2■□□□□ 0.98
PBX3-205ENST00000373492 CPLX2Q6PUV4 134 aaKnown RBP21.2■□□□□ 0.98
PBX3-205ENST00000373492 NSMFQ6X4W1 530 aa21.2■□□□□ 0.98
PBX3-205ENST00000373492 NOL8Q76FK4 1167 aaKnown RBP21.2■□□□□ 0.98
PBX3-205ENST00000373492 TRPV1Q8NER1 839 aa21.2■□□□□ 0.98
PBX3-205ENST00000373492 DDX20Q9UHI6 824 aaKnown RBP21.2■□□□□ 0.98
PBX3-205ENST00000373492 PCDHA1Q9Y5I3 950 aa21.2■□□□□ 0.98
PBX3-205ENST00000373492 SYNGAP1Q96PV0 1343 aa21.2■□□□□ 0.98
PBX3-205ENST00000373492 POTEB2H3BUK9 544 aa21.19■□□□□ 0.98
PBX3-205ENST00000373492 ST18O60284 1047 aa21.19■□□□□ 0.98
PBX3-205ENST00000373492 TAL1P17542 331 aaPredicted RBP21.19■□□□□ 0.98
PBX3-205ENST00000373492 MCF2L2Q86YR7 1114 aa21.19■□□□□ 0.98
PBX3-205ENST00000373492 RBM27Q9P2N5 1060 aaKnown RBP21.19■□□□□ 0.98
PBX3-205ENST00000373492 TPCN1Q9ULQ1 816 aa21.19■□□□□ 0.98
PBX3-205ENST00000373492 KIAA1217Q5T5P2 1943 aa21.19■□□□□ 0.98
PBX3-205ENST00000373492 NFIBO00712 420 aa21.18■□□□□ 0.98
PBX3-205ENST00000373492 SEPT4O43236 478 aa21.18■□□□□ 0.98
PBX3-205ENST00000373492 AKAP17AQ02040 695 aaKnown RBP21.18■□□□□ 0.98
PBX3-205ENST00000373492 FAM133AQ8N9E0 248 aa21.18■□□□□ 0.98
PBX3-205ENST00000373492 MAF1Q9H063 256 aa21.18■□□□□ 0.98
PBX3-205ENST00000373492 NCOA5Q9HCD5 579 aaKnown RBP21.18■□□□□ 0.98
PBX3-205ENST00000373492 CYP39A1Q9NYL5 469 aa21.18■□□□□ 0.98
PBX3-205ENST00000373492 CNPY2Q9Y2B0 182 aa21.18■□□□□ 0.98
PBX3-205ENST00000373492 FRMPD3Q5JV73 1810 aa21.18■□□□□ 0.98
PBX3-205ENST00000373492 PTPDC1A2A3K4 754 aa21.17■□□□□ 0.98
PBX3-205ENST00000373492 PPP1R11O60927 126 aaPredicted RBP21.17■□□□□ 0.98
PBX3-205ENST00000373492 PRAMEF19Q5SWL8 479 aa21.17■□□□□ 0.98
PBX3-205ENST00000373492 RNF207Q6ZRF8 634 aa21.17■□□□□ 0.98
PBX3-205ENST00000373492 CLEC4DQ8WXI8 215 aa21.17■□□□□ 0.98
PBX3-205ENST00000373492 FGD4Q96M96 766 aa21.17■□□□□ 0.98
PBX3-205ENST00000373492 LIMCH1Q9UPQ0 1083 aa21.17■□□□□ 0.98
PBX3-205ENST00000373492 V9GY48 417 aaPredicted RBP21.17■□□□□ 0.98
PBX3-205ENST00000373492 PDE4DIPQ5VU43 2346 aa21.17■□□□□ 0.98
PBX3-205ENST00000373492 PFKFB2O60825 505 aa21.16■□□□□ 0.98
PBX3-205ENST00000373492 IFNAR1P17181 557 aa21.16■□□□□ 0.98
PBX3-205ENST00000373492 FUT2Q10981 343 aa21.16■□□□□ 0.98
PBX3-205ENST00000373492 TRIM22Q8IYM9 498 aa21.16■□□□□ 0.98
PBX3-205ENST00000373492 RGS22Q8NE09 1264 aa21.16■□□□□ 0.98
PBX3-205ENST00000373492 TNRC18O15417 2968 aaPredicted RBP21.16■□□□□ 0.98
PBX3-205ENST00000373492 hCG_1642624A0A1W2PR95 340 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 ASB14A6NK59 587 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 hCG_1984214I3L0E3 225 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 CDKL5O76039 1030 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 SNAI1O95863 264 aaPredicted RBP21.15■□□□□ 0.98
PBX3-205ENST00000373492 CNTN2Q02246 1040 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 SCRN1Q12765 414 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 NECAB2Q7Z6G3 386 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 SAMD3Q8N6K7 520 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 ZNF713Q8N859 430 aaPredicted RBP21.15■□□□□ 0.98
PBX3-205ENST00000373492 ZSCAN31Q96LW9 406 aaPredicted RBP21.15■□□□□ 0.98
PBX3-205ENST00000373492 HTATIP2Q9BUP3 242 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 RNF26Q9BY78 433 aaPredicted RBP21.15■□□□□ 0.98
PBX3-205ENST00000373492 LRRC37A2A6NM11 1700 aa21.15■□□□□ 0.98
PBX3-205ENST00000373492 SOWAHBA6NEL2 793 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 PRPF3O43395 683 aaKnown RBP21.14■□□□□ 0.97
PBX3-205ENST00000373492 CFBP00751 764 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 ZNF865P0CJ78 1059 aaPredicted RBP21.14■□□□□ 0.97
PBX3-205ENST00000373492 MNX1P50219 401 aaPredicted RBP21.14■□□□□ 0.97
PBX3-205ENST00000373492 SSRP1Q08945 709 aaKnown RBP21.14■□□□□ 0.97
PBX3-205ENST00000373492 BAATQ14032 418 aaPredicted RBP21.14■□□□□ 0.97
PBX3-205ENST00000373492 NTRK3Q16288 839 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 ME3Q16798 604 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 ARMCX2Q7L311 632 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 HEATR3Q7Z4Q2 680 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 PHKBQ93100 1093 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 PAWRQ96IZ0 340 aaKnown RBP21.14■□□□□ 0.97
PBX3-205ENST00000373492 SLC26A6Q9BXS9 759 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 ABHD16BQ9H3Z7 469 aa21.14■□□□□ 0.97
PBX3-205ENST00000373492 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.14■□□□□ 0.97
PBX3-205ENST00000373492 MAP3K20Q9NYL2 800 aaKnown RBP21.14■□□□□ 0.97
PBX3-205ENST00000373492 LOC102724159A0A0B4J2E5 919 aa21.13■□□□□ 0.97
PBX3-205ENST00000373492 CALML3P27482 149 aa21.13■□□□□ 0.97
PBX3-205ENST00000373492 RPS6P62753 249 aaKnown RBP21.13■□□□□ 0.97
PBX3-205ENST00000373492 PWP2Q15269 919 aaKnown RBP21.13■□□□□ 0.97
PBX3-205ENST00000373492 SLC30A10Q6XR72 485 aa21.13■□□□□ 0.97
PBX3-205ENST00000373492 DIS3LQ8TF46 1054 aaKnown RBP21.13■□□□□ 0.97
PBX3-205ENST00000373492 ADD3Q9UEY8 706 aaKnown RBP21.13■□□□□ 0.97
PBX3-205ENST00000373492 MYH7BA7E2Y1 1941 aa21.12■□□□□ 0.97
PBX3-205ENST00000373492 LARGE1O95461 756 aa21.12■□□□□ 0.97
PBX3-205ENST00000373492 SCG2P13521 617 aa21.12■□□□□ 0.97
PBX3-205ENST00000373492 AKR1A1P14550 325 aa21.12■□□□□ 0.97
PBX3-205ENST00000373492 ACVR2BQ13705 512 aa21.12■□□□□ 0.97
PBX3-205ENST00000373492 PFKFB3Q16875 520 aaPredicted RBP21.12■□□□□ 0.97
PBX3-205ENST00000373492 ARRDC4Q8NCT1 418 aa21.12■□□□□ 0.97
PBX3-205ENST00000373492 GPKOWQ92917 476 aaPredicted RBP eCLIP21.12■□□□□ 0.97
PBX3-205ENST00000373492 GTF3C6Q969F1 213 aa21.12■□□□□ 0.97
PBX3-205ENST00000373492 SH2B1Q9NRF2 756 aaPredicted RBP21.12■□□□□ 0.97
PBX3-205ENST00000373492 RARBP10826 455 aa21.11■□□□□ 0.97
PBX3-205ENST00000373492 MCM2P49736 904 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms