RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PSMD7P51665 324 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 PLOD1Q02809 727 aaPredicted RBP11.71□□□□□ -0.53
TRERF1-203ENST00000372917 DDB1Q16531 1140 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 MUM1Q2TAK8 710 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 RASGRP2Q7LDG7 609 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 TRAPPC11Q7Z392 1133 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 APBB1IPQ7Z5R6 666 aaPredicted RBP11.71□□□□□ -0.53
TRERF1-203ENST00000372917 SPO11Q9Y5K1 396 aa11.71□□□□□ -0.53
TRERF1-203ENST00000372917 RIMBP3CA6NJZ7 1639 aa11.71□□□□□ -0.54
TRERF1-203ENST00000372917 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.54
TRERF1-203ENST00000372917 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.54
TRERF1-203ENST00000372917 HIP1O00291 1037 aa11.71□□□□□ -0.54
TRERF1-203ENST00000372917 HGSO14964 777 aaPredicted RBP11.71□□□□□ -0.54
TRERF1-203ENST00000372917 GIGYF2Q6Y7W6 1299 aaKnown RBP11.71□□□□□ -0.54
TRERF1-203ENST00000372917 MAP7D3Q8IWC1 876 aa11.71□□□□□ -0.54
TRERF1-203ENST00000372917 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.54
TRERF1-203ENST00000372917 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.54
TRERF1-203ENST00000372917 ABCA9Q8IUA7 1624 aa11.71□□□□□ -0.54
TRERF1-203ENST00000372917 NEXMIFQ5QGS0 1516 aa11.71□□□□□ -0.54
TRERF1-203ENST00000372917 TRAPPC3O43617 180 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 SARSP49591 514 aaKnown RBP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 VAV2P52735 878 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 SGSM1Q2NKQ1 1148 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 PUS10Q3MIT2 529 aaKnown RBP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 CCNJLQ8IV13 435 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 RNF10Q8N5U6 811 aaKnown RBP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 MLKLQ8NB16 471 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 SPATA17Q96L03 361 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 DUSP9Q99956 384 aaKnown RBP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 ARHGEF38Q9NXL2 777 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 SUCLA2Q9P2R7 463 aaPredicted RBP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 KNDC1Q76NI1 1749 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 GNAT3A8MTJ3 354 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 HMGB1P1B2RPK0 211 aaPredicted RBP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 ABLIM1O14639 778 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 TROVE2P10155 538 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 EMBQ6PCB8 327 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 EXOC3L1Q86VI1 746 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 HAUS1Q96CS2 278 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 CCDC87Q9NVE4 849 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 PLAAQ9Y263 795 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 NFE2L3Q9Y4A8 694 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 PTPRMP28827 1452 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 PI4KAP2A4QPH2 592 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 NAA16Q6N069 864 aaPredicted RBP11.7□□□□□ -0.54
TRERF1-203ENST00000372917 RAB11FIP4Q86YS3 637 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 PI4KAP1Q8N8J0 262 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 UCMAQ8WVF2 138 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 RAPGEF5Q92565 580 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 DDX12PQ92771 950 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 ITIH6Q6UXX5 1313 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 KIF20BQ96Q89 1820 aa11.7□□□□□ -0.54
TRERF1-203ENST00000372917 SMIM23A6NLE4 172 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 CPLX1O14810 134 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 MMEP08473 750 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 STIP1P31948 543 aaKnown RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ZNF554Q86TJ5 538 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 SRPK1Q96SB4 655 aaKnown RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 NAA15Q9BXJ9 866 aaKnown RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ETNK2Q9NVF9 386 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 STIM2Q9P246 746 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 SALL3Q9BXA9 1300 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 SBNO1A3KN83 1393 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 H0Y3Z8 333 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 HARSP12081 509 aaKnown RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ITGB3BPQ13352 177 aaPredicted RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 BYSLQ13895 437 aaKnown RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 FAM47EQ6ZV65 393 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ERMNQ8TAM6 284 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 LZICQ8WZA0 190 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 TAF1DQ9H5J8 278 aaPredicted RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ECT2Q9H8V3 914 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ZMYND8Q9ULU4 1186 aaPredicted RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 PYGMP11217 842 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ATP6V1C1P21283 382 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 PNOCQ13519 176 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 COL9A3Q14050 684 aaPredicted RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ADALQ6DHV7 355 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 NME8Q8N427 588 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 POLR3CQ9BUI4 534 aaPredicted RBP11.69□□□□□ -0.54
TRERF1-203ENST00000372917 RMND1Q9NWS8 449 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 ADAM22Q9P0K1 906 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 CROTQ9UKG9 612 aa11.69□□□□□ -0.54
TRERF1-203ENST00000372917 GNA14O95837 355 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 KCNA3P22001 575 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 CASP14P31944 242 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 PPARAQ07869 468 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 FOXB2Q5VYV0 432 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 LMBRD2Q68DH5 695 aaPredicted RBP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 CCDC129Q6ZRS4 1044 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 SAMD3Q8N6K7 520 aa11.68□□□□□ -0.54
TRERF1-203ENST00000372917 LUC7LQ9NQ29 371 aaKnown RBP11.68□□□□□ -0.54
TRERF1-203ENST00000372917 TFR2Q9UP52 801 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms