RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 ARHGEF35A5YM69 484 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 ZBBXA8MT70 800 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 STX17P56962 302 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 MYL5Q02045 173 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 MAK16Q9BXY0 300 aaKnown RBP15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 FAM204AQ9H8W3 233 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 CIAO1O76071 339 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 PPP4R1Q8TF05 950 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 RNF181Q9P0P0 153 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 ANGPTL2Q9UKU9 493 aa15.37■□□□□ 0.05
RAPGEF1-202ENST00000372190 FRMPD2Q68DX3 1309 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 LOC102724159A0A0B4J2E5 919 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 RGS16O15492 202 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 RFX1P22670 979 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 DEUP1Q05D60 604 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 CCDC15Q0P6D6 951 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 PWP2Q15269 919 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 KRT25Q7Z3Z0 450 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 DPP9Q86TI2 863 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 PLEKHF1Q96S99 279 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 NARFQ9UHQ1 456 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 ELP1O95163 1332 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 CDK12Q9NYV4 1490 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 TRPA1O75762 1119 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 USP14P54578 494 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 ZNF445P59923 1031 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 MKRN3Q13064 507 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 CAMSAP1Q5T5Y3 1602 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 PDE6AP16499 860 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 TMED10P49755 219 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 IRX5P78411 483 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 PPP2R5BQ15173 497 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 NONOQ15233 471 aaKnown RBP eCLIP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 GLG1Q92896 1179 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 FNBP1Q96RU3 617 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 MYL10Q9BUA6 226 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 PUS3Q9BZE2 481 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 TXKP42681 527 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 PHKA1P46020 1223 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 RNASELQ05823 741 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 SUSD4Q5VX71 490 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 KRT80Q6KB66 452 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 CCDC117Q8IWD4 279 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 LRRC47Q8N1G4 583 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 TRIML2Q8N7C3 387 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 STMN3Q9NZ72 180 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 SUFUQ9UMX1 484 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 MRPL11Q9Y3B7 192 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 AFG3L2Q9Y4W6 797 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 TULP4Q9NRJ4 1543 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 ARHGAP4P98171 946 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 MRRFQ96E11 262 aaKnown RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 POLR3CQ9BUI4 534 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 PNMA2Q9UL42 364 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 AXIN2Q9Y2T1 843 aa15.36■□□□□ 0.05
RAPGEF1-202ENST00000372190 COL15A1P39059 1388 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 RIMS1Q86UR5 1692 aaKnown RBP15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 TESPA1A2RU30 521 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 CYP27B1O15528 508 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 R3HDM1Q15032 1099 aaKnown RBP15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 IFNL3Q8IZI9 196 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 KIFC3Q9BVG8 833 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 ARIH1Q9Y4X5 557 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 ORC6Q9Y5N6 252 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 PLCD1P51178 756 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 SF3A3Q12874 501 aaKnown RBP eCLIP15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 ARHGAP44Q17R89 818 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 MCF2L2Q86YR7 1114 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 C2orf69Q8N8R5 385 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 DSCC1Q9BVC3 393 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 GLI2P10070 1586 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 RWDD2BP57060 319 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 TRIM14Q14142 442 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 P3H4Q92791 437 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 NOP53Q9NZM5 478 aaKnown RBP15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 DAB1O75553 588 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 SUN1O94901 812 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 CPA1P15085 419 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 ARID5AQ03989 594 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 CCDC197Q8NCU1 140 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 PARP2Q9UGN5 583 aa15.35■□□□□ 0.05
RAPGEF1-202ENST00000372190 PDE4DQ08499 809 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 KCTD2Q14681 263 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 BTN2A1Q7KYR7 527 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 ANKRD42Q8N9B4 389 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 MGARPQ8TDB4 240 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 EXOC7Q9UPT5 735 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 C1orf167Q5SNV9 1468 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 CNGB3Q9NQW8 809 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 EPS15L1Q9UBC2 864 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 PPME1Q9Y570 386 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 IQUBQ8NA54 791 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 SLC10A4Q96EP9 437 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 KDM2BQ8NHM5 1336 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 RPS6KA2Q15349 733 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 TCP11Q8WWU5 503 aa15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 ZSCAN10Q96SZ4 725 aaPredicted RBP15.34■□□□□ 0.05
RAPGEF1-202ENST00000372190 CARMIL3Q8ND23 1372 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms