RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 PGBD1Q96JS3 809 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 PANX2Q96RD6 677 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 SH3GLB2Q9NR46 395 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 SPTLC3Q9NUV7 552 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 ZDHHC9Q9Y397 364 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 PTPRUQ92729 1446 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 TESPA1A2RU30 521 aaPredicted RBP13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 ZBED6P86452 979 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 APBA1Q02410 837 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 PSMD2Q13200 908 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 XKR9Q5GH70 373 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 MB21D2Q8IYB1 491 aaPredicted RBP13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 WDR11Q9BZH6 1224 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 SAMSN1Q9NSI8 373 aaKnown RBP13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 NRKQ7Z2Y5 1582 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 A0A087WWV3 80 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 K7ENM7 598 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 USP17L8P0C7I0 530 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 NR2F2P24468 414 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 GTF2A1P52655 376 aaPredicted RBP13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 CYP4A11Q02928 519 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 DENND2CQ68D51 928 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 TMTC3Q6ZXV5 915 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 SMYD4Q8IYR2 804 aaPredicted RBP13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 PDLIM2Q96JY6 352 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 THAP9Q9H5L6 903 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 GRAMD1CQ8IYS0 662 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 SLC17A8Q8NDX2 589 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 EEF2KMTQ96G04 330 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 PAGE5Q96GU1 130 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 PIGSQ96S52 555 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 ODR4Q5SWX8 454 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 ARHGEF16Q5VV41 709 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 ARMCX5Q6P1M9 558 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 GJA10Q969M2 543 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 C1orf112Q9NSG2 853 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 E7EVH7 732 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 RNF14Q9UBS8 474 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 USTQ9Y2C2 406 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
DEPDC1-201ENST00000370966 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
DEPDC1-201ENST00000370966 BUB1O43683 1085 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 RPS6KA4O75676 772 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 FYB2Q5VWT5 728 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 FAM71BQ8TC56 605 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 EPSTI1Q96J88 318 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 GDAP1L1Q96MZ0 367 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 CCDC151A5D8V7 595 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 GOLGA8KD6RF30 607 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 CTNNA1P35221 906 aaKnown RBP13□□□□□ -0.33
DEPDC1-201ENST00000370966 PABPC4Q13310 644 aaKnown RBP eCLIP13□□□□□ -0.33
DEPDC1-201ENST00000370966 FAM102BQ5T8I3 360 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 LGSNQ5TDP6 509 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 P4HA1P13674 534 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 ZSCAN26Q16670 478 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 FMR1NBQ8N0W7 255 aaPredicted RBP13□□□□□ -0.33
DEPDC1-201ENST00000370966 FNBP4Q8N3X1 1017 aaPredicted RBP13□□□□□ -0.33
DEPDC1-201ENST00000370966 GLG1Q92896 1179 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13□□□□□ -0.33
DEPDC1-201ENST00000370966 REREQ9P2R6 1566 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 GBP1P32455 592 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 BAG6P46379 1132 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 LIG4P49917 911 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 DIXDC1Q155Q3 683 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 UAP1Q16222 522 aaPredicted RBP13□□□□□ -0.33
DEPDC1-201ENST00000370966 USP17L2Q6R6M4 530 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 BPIFA3Q9BQP9 254 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 PI4KBQ9UBF8 816 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 CCPG1Q9ULG6 757 aa13□□□□□ -0.33
DEPDC1-201ENST00000370966 STK10O94804 968 aaKnown RBP12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 ATP1A3P13637 1013 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 LMNB1P20700 586 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 SGMS1Q86VZ5 419 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 CSRNP1Q96S65 589 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 DISC1Q9NRI5 854 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 CDC25AP30304 524 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 LRRC63Q05C16 580 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 ZBTB8OSQ8IWT0 167 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 TRIM6Q9C030 488 aaPredicted RBP12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 PTPRMP28827 1452 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 RGS16O15492 202 aaPredicted RBP12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 BMP3P12645 472 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 CDK8P49336 464 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 BPIFB4P59827 614 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 PPM1KQ8N3J5 372 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 HOMER3Q9NSC5 361 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 TRPC6Q9Y210 931 aa12.99□□□□□ -0.33
DEPDC1-201ENST00000370966 PSMC2P35998 433 aaKnown RBP12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 PDE6CP51160 858 aa12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
DEPDC1-201ENST00000370966 CEP85LQ5SZL2 805 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms