RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
EXOSC1-204ENST00000370902 TNFRSF10AO00220 468 aa13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 MX1P20591 662 aa13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 EDNRBP24530 442 aa13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 SLC16A2P36021 539 aa13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 PURAQ00577 322 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 BAATQ14032 418 aaPredicted RBP13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 TTLL4Q14679 1199 aa13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 IQSEC1Q6DN90 963 aa13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 ATXN2LQ8WWM7 1075 aaKnown RBP13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 CTAGE1Q96RT6 745 aa13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 GAS2L1Q99501 681 aaPredicted RBP13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 THEGQ9P2T0 379 aa13.08□□□□□ -0.32
EXOSC1-204ENST00000370902 TRIP12Q14669 1992 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 A0A0D9SFI3 127 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 EPOPA6NHQ4 379 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 TSPY2A6NKD2 308 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 FGBP02675 491 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 SNHG28P0DPA3 235 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 CYP2C9P11712 490 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 PPP1R13LQ8WUF5 828 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 DCAF4Q8WV16 495 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 PPM1EQ8WY54 764 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 ASB2Q96Q27 587 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
EXOSC1-204ENST00000370902 MYH6P13533 1939 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 ERC2O15083 957 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 ARIH2O95376 493 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 PDHBP11177 359 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 ALX1Q15699 326 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 SYDE2Q5VT97 1194 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 NOL8Q76FK4 1167 aaKnown RBP13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 ADAMTS19Q8TE59 1207 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 FAM227BQ96M60 508 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 SEZ6LQ9BYH1 1024 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 AP5M1Q9H0R1 490 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 RAPGEFL1Q9UHV5 662 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 TNKSO95271 1327 aa13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
EXOSC1-204ENST00000370902 BRWD1Q9NSI6 2320 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 LOC102724159A0A0B4J2E5 919 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 SLC3A2P08195 630 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 GPNMBQ14956 572 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 PWP2Q15269 919 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 CCDC85BQ15834 202 aaPredicted RBP13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 CCDC96Q2M329 555 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 LRRFIP1Q32MZ4 808 aaKnown RBP13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 SPRED2Q7Z698 418 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 TBC1D10CQ8IV04 446 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 COPS5Q92905 334 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 WDR11Q9BZH6 1224 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 TCP11L1Q9NUJ3 509 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 MSRAQ9UJ68 235 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 PCDHA11Q9Y5I1 949 aa13.05□□□□□ -0.32
EXOSC1-204ENST00000370902 SIP14410 1827 aa13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 RANBP6O60518 1105 aaKnown RBP13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 FGAP02671 866 aa13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 POU3F3P20264 500 aaPredicted RBP13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 PPP2R2DQ66LE6 453 aa13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 NECAB3Q96P71 396 aaPredicted RBP13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 SLC28A3Q9HAS3 691 aa13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 WDR19Q8NEZ3 1342 aa13.04□□□□□ -0.32
EXOSC1-204ENST00000370902 A6NJR5 290 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 RFXAPO00287 272 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 ZEB2O60315 1214 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 CA3P07451 260 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 BMP1P13497 986 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 ATP2A2P16615 1042 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 COL9A1P20849 921 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 IGFBP4P22692 258 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 PDE1AP54750 535 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 TFF2Q03403 129 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 ZNF543Q08ER8 600 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 NBPF20Q3BBV1 942 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 KRT40Q6A162 431 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 OR6J1Q8NGC5 347 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 MTIF3Q9H2K0 278 aaKnown RBP13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 CPVLQ9H3G5 476 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 POLR3EQ9NVU0 708 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 COL20A1Q9P218 1284 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 NEDD4P46934 1319 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 ATG2AQ2TAZ0 1938 aa13.03□□□□□ -0.32
EXOSC1-204ENST00000370902 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
EXOSC1-204ENST00000370902 PFKMP08237 780 aa13.02□□□□□ -0.33
EXOSC1-204ENST00000370902 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.33
EXOSC1-204ENST00000370902 CALML3P27482 149 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms