RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 XKR5Q6UX68 686 aa4.32□□□□□ -1.72
MCF2-202ENST00000370573 PI16Q6UXB8 463 aa4.32□□□□□ -1.72
MCF2-202ENST00000370573 AACSQ86V21 672 aa4.32□□□□□ -1.72
MCF2-202ENST00000370573 CERS3Q8IU89 383 aa4.32□□□□□ -1.72
MCF2-202ENST00000370573 VGLL2Q8N8G2 317 aa4.32□□□□□ -1.72
MCF2-202ENST00000370573 WFDC12Q8WWY7 111 aa4.32□□□□□ -1.72
MCF2-202ENST00000370573 TP53INP1Q96A56 240 aa4.32□□□□□ -1.72
MCF2-202ENST00000370573 LATS2Q9NRM7 1088 aa4.32□□□□□ -1.72
MCF2-202ENST00000370573 ANKRD31Q8N7Z5 1873 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 SNAP23O00161 211 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 NPHP1O15259 732 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 DDX3YO15523 660 aaKnown RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 MX1P20591 662 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 NOS3P29474 1203 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 CDC27P30260 824 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 RPS8P62241 208 aaKnown RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 ST5P78524 1137 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 TNNI3KQ59H18 835 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 NKAPLQ5M9Q1 402 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 TTC22Q5TAA0 569 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 MEI1Q5TIA1 1274 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 CLASRPQ8N2M8 674 aaKnown RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 DBNDD2Q9BQY9 259 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 BRIP1Q9BX63 1249 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 GPR108Q9NPR9 543 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 DZANK1Q9NVP4 752 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 DBNLQ9UJU6 430 aaKnown RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 FPGT-TNNI3KV9GXZ4 949 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 LRP5O75197 1615 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 TAF5LO75529 589 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 ZBTB7AO95365 584 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 ADORA1P30542 326 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 HOXA10P31260 410 aaPredicted RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 IGHMBP2P38935 993 aaKnown RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 FGD1P98174 961 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 METTL24Q5JXM2 366 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 NOL8Q76FK4 1167 aaKnown RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 DDX46Q7L014 1031 aaKnown RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 ANKRD18AQ8IVF6 992 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 ZNF654Q8IZM8 581 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 PI4K2BQ8TCG2 481 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 SLC7A3Q8WY07 619 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 CDC5LQ99459 802 aaKnown RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 OSMRQ99650 979 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 CNNM1Q9NRU3 951 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 BSDC1Q9NW68 430 aaPredicted RBP4.31□□□□□ -1.72
MCF2-202ENST00000370573 KCNK4Q9NYG8 393 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 KLHL42Q9P2K6 505 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 MINPP1Q9UNW1 487 aa4.31□□□□□ -1.72
MCF2-202ENST00000370573 A0A1B0GUL7 405 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 NFKBIEO00221 500 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 PDE8BO95263 885 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 IFIT2P09913 472 aaKnown RBP4.3□□□□□ -1.72
MCF2-202ENST00000370573 SRGNP10124 158 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 ATF4P18848 351 aaPredicted RBP4.3□□□□□ -1.72
MCF2-202ENST00000370573 FGFR2P21802 821 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 CHRNDQ07001 517 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 GRAPQ13588 217 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 PTPROQ16827 1216 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 GRAPLQ8TC17 118 aaPredicted RBP4.3□□□□□ -1.72
MCF2-202ENST00000370573 NEUROD6Q96NK8 337 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 CSRNP1Q96S65 589 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 MPHOSPH8Q99549 860 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 ZKSCAN3Q9BRR0 538 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 ANP32EQ9BTT0 268 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 OSBPL7Q9BZF2 842 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 SPEF2Q9C093 1822 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 PDE2AO00408 941 aaPredicted RBP4.3□□□□□ -1.72
MCF2-202ENST00000370573 EIF1AYO14602 144 aaKnown RBP4.3□□□□□ -1.72
MCF2-202ENST00000370573 WISP1O95388 367 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 MAP4K4O95819 1239 aaPredicted RBP4.3□□□□□ -1.72
MCF2-202ENST00000370573 SDSP20132 328 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 CHRNA5P30532 468 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 USP5P45974 858 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 GJA8P48165 433 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 ATP2B3Q16720 1220 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 BMP2KLQ5H9B9 411 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 ASAP3Q8TDY4 903 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 RPGRQ92834 1020 aaKnown RBP4.3□□□□□ -1.72
MCF2-202ENST00000370573 KCNB2Q92953 911 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 RBM17Q96I25 401 aaKnown RBP4.3□□□□□ -1.72
MCF2-202ENST00000370573 MEGF10Q96KG7 1140 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 ECHDC1Q9NTX5 307 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 GGT7Q9UJ14 662 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 AKAP2Q9Y2D5 859 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 AOX1Q06278 1338 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 MROH5Q6ZUA9 1318 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 ZNF609O15014 1411 aa4.3□□□□□ -1.72
MCF2-202ENST00000370573 METTL12A8MUP2 240 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 FSCN2O14926 492 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 DYRK3O43781 588 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 PTPRAP18433 802 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 PDE6BP35913 854 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 PAK2Q13177 524 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 HGSNATQ68CP4 663 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 TTC41PQ6P2S7 1318 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 C2CD5Q86YS7 1000 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 SNX29Q8TEQ0 813 aa4.29□□□□□ -1.72
MCF2-202ENST00000370573 KLHDC7BQ96G42 594 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms