RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 USP17L19D6RCP7 530 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 USP17L20D6RJB6 530 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 ZBTB48P10074 688 aaPredicted RBP19.69■□□□□ 0.74
UBE3D-203ENST00000369747 PTPREP23469 700 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 USP17L24Q0WX57 530 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 RGMBQ6NW40 437 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 RASAL3Q86YV0 1011 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 TNFRSF25Q93038 417 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 ATG4CQ96DT6 458 aa19.69■□□□□ 0.74
UBE3D-203ENST00000369747 RANBP17Q9H2T7 1088 aaKnown RBP19.69■□□□□ 0.74
UBE3D-203ENST00000369747 ADAMTS3O15072 1205 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 COG2Q14746 738 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 GPAT2Q6NUI2 795 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 CCDC174Q6PII3 467 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 FASTKD5Q7L8L6 764 aaKnown RBP19.68■□□□□ 0.74
UBE3D-203ENST00000369747 GTF2A2P52657 109 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 GRIN1Q05586 938 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 USH1GQ495M9 461 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 PLA2G4DQ86XP0 818 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 DHX40Q8IX18 779 aaKnown RBP19.68■□□□□ 0.74
UBE3D-203ENST00000369747 AGTPBP1Q9UPW5 1226 aa19.68■□□□□ 0.74
UBE3D-203ENST00000369747 ATP2B1P20020 1258 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 HOXA7P31268 230 aaPredicted RBP19.67■□□□□ 0.74
UBE3D-203ENST00000369747 NAPAP54920 295 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 CEP57L1Q8IYX8 460 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 BRI3BPQ8WY22 251 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 SLC38A10Q9HBR0 1119 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 BRMS1Q9HCU9 246 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 KCNH3Q9ULD8 1083 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 CEP131Q9UPN4 1083 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 PCDHA1Q9Y5I3 950 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 MORC2Q9Y6X9 1032 aaPredicted RBP19.67■□□□□ 0.74
UBE3D-203ENST00000369747 ZNF536O15090 1300 aa19.67■□□□□ 0.74
UBE3D-203ENST00000369747 CCL15-CCL14A0A0B4J2E2 113 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 VWA5AO00534 786 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 CETPP11597 493 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 DSG3P32926 999 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 ZNF75DP51815 510 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 CCL15Q16663 113 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 NOM1Q5C9Z4 860 aaKnown RBP19.66■□□□□ 0.74
UBE3D-203ENST00000369747 SPECC1Q5M775 1068 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 FBXO11Q86XK2 927 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 ZNF830Q96NB3 372 aaPredicted RBP19.66■□□□□ 0.74
UBE3D-203ENST00000369747 AMNQ9BXJ7 453 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 SH3GLB2Q9NR46 395 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 SRPRBQ9Y5M8 271 aaKnown RBP19.66■□□□□ 0.74
UBE3D-203ENST00000369747 SPDYE16A6NNV3 312 aaPredicted RBP19.66■□□□□ 0.74
UBE3D-203ENST00000369747 GOLGA6L19H0YKK7 550 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 NLRP5P59047 1200 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 DPCR1Q3MIW9 517 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 POTEEQ6S8J3 1075 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 CPXCR1Q8N123 301 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 ZNF579Q8NAF0 562 aaKnown RBP19.66■□□□□ 0.74
UBE3D-203ENST00000369747 AGBL1Q96MI9 1066 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 ASCC2Q9H1I8 757 aaPredicted RBP19.66■□□□□ 0.74
UBE3D-203ENST00000369747 ADAMTS5Q9UNA0 930 aa19.66■□□□□ 0.74
UBE3D-203ENST00000369747 COL11A1P12107 1806 aaPredicted RBP19.65■□□□□ 0.74
UBE3D-203ENST00000369747 WNT7AO00755 349 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 NLRP12P59046 1061 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 LONRF3Q496Y0 759 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 SARM1Q6SZW1 724 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 SPC24Q8NBT2 197 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 P2RX7Q99572 595 aaKnown RBP19.65■□□□□ 0.74
UBE3D-203ENST00000369747 PTPN18Q99952 460 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 TRIM5Q9C035 493 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 NAT10Q9H0A0 1025 aaKnown RBP19.65■□□□□ 0.74
UBE3D-203ENST00000369747 HOXC10Q9NYD6 342 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 TUBE1Q9UJT0 475 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 CEP350Q5VT06 3117 aa19.65■□□□□ 0.74
UBE3D-203ENST00000369747 FAM155AB1AL88 458 aaPredicted RBP19.64■□□□□ 0.74
UBE3D-203ENST00000369747 BTBD19C9JJ37 291 aa19.64■□□□□ 0.74
UBE3D-203ENST00000369747 PEX10O60683 326 aa19.64■□□□□ 0.74
UBE3D-203ENST00000369747 KRBA2Q6ZNG9 492 aa19.64■□□□□ 0.74
UBE3D-203ENST00000369747 TTC12Q9H892 705 aaPredicted RBP19.64■□□□□ 0.74
UBE3D-203ENST00000369747 RAVER2Q9HCJ3 691 aaKnown RBP19.64■□□□□ 0.74
UBE3D-203ENST00000369747 SMCO2A6NFE2 343 aa19.64■□□□□ 0.73
UBE3D-203ENST00000369747 hCG_1984214I3L0E3 225 aa19.64■□□□□ 0.73
UBE3D-203ENST00000369747 BIN1O00499 593 aa19.64■□□□□ 0.73
UBE3D-203ENST00000369747 SLC10A3P09131 477 aa19.64■□□□□ 0.73
UBE3D-203ENST00000369747 IRX3P78415 501 aaPredicted RBP19.64■□□□□ 0.73
UBE3D-203ENST00000369747 AOPEPQ8N6M6 819 aa19.64■□□□□ 0.73
UBE3D-203ENST00000369747 ZNF713Q8N859 430 aaPredicted RBP19.64■□□□□ 0.73
UBE3D-203ENST00000369747 CCDC148Q8NFR7 591 aa19.64■□□□□ 0.73
UBE3D-203ENST00000369747 BPIFA3Q9BQP9 254 aa19.64■□□□□ 0.73
UBE3D-203ENST00000369747 ZMYND12Q9H0C1 365 aa19.64■□□□□ 0.73
UBE3D-203ENST00000369747 BECN2A8MW95 431 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 ICAM1P05362 532 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 GRM1Q13255 1194 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 PNOCQ13519 176 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 ZRSR1Q15695 479 aaKnown RBP19.63■□□□□ 0.73
UBE3D-203ENST00000369747 REPS2Q8NFH8 660 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 CCDC12Q8WUD4 166 aaPredicted RBP19.63■□□□□ 0.73
UBE3D-203ENST00000369747 FAM13BQ9NYF5 915 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 ZBED4O75132 1171 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 TMEM132BQ14DG7 1078 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.63■□□□□ 0.73
UBE3D-203ENST00000369747 ELOA2Q8IYF1 753 aaPredicted RBP19.63■□□□□ 0.73
UBE3D-203ENST00000369747 RASGRP4Q8TDF6 673 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 CSRNP2Q9H175 543 aa19.63■□□□□ 0.73
UBE3D-203ENST00000369747 CCPG1Q9ULG6 757 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms