RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 RAB21Q9UL25 225 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 L3MBTL1Q9Y468 752 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 FLT4P35916 1363 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 SAMD9LQ8IVG5 1584 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 ZNF521Q96K83 1311 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 SYNRGQ9UMZ2 1314 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 VWA3AA6NCI4 1184 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 AP5Z1O43299 807 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 ESRRBO95718 433 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 CCDC15Q0P6D6 951 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 CREB3L3Q68CJ9 461 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
PRDM1-201ENST00000369089 MEIS3Q99687 375 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 NQO1P15559 274 aaKnown RBP11.37□□□□□ -0.59
PRDM1-201ENST00000369089 GSTT1P30711 240 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 SLC5A9Q2M3M2 681 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 KCNB2Q92953 911 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 LLPHQ9BRT6 129 aaKnown RBP11.37□□□□□ -0.59
PRDM1-201ENST00000369089 TM6SF1Q9BZW5 370 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 PTPRTO14522 1441 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 MAP3K19Q56UN5 1328 aa11.37□□□□□ -0.59
PRDM1-201ENST00000369089 POTEFA5A3E0 1075 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 GOLGA8BA8MQT2 603 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 MAGEA1P43355 309 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 TMEM259Q4ZIN3 620 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 Q6ZUG5 572 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 TRPM8Q7Z2W7 1104 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 TRIML2Q8N7C3 387 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 RNPC3Q96LT9 517 aaKnown RBP11.36□□□□□ -0.59
PRDM1-201ENST00000369089 TRIM31Q9BZY9 425 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 ECHDC1Q9NTX5 307 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 EURLQ9NYK6 297 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 GGA2Q9UJY4 613 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 UBN2Q6ZU65 1347 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 HARSP12081 509 aaKnown RBP11.36□□□□□ -0.59
PRDM1-201ENST00000369089 AARSP49588 968 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRDM1-201ENST00000369089 ITGB3BPQ13352 177 aaPredicted RBP11.36□□□□□ -0.59
PRDM1-201ENST00000369089 CEP85Q6P2H3 762 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 EYA1Q99502 592 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 HOMER2Q9NSB8 354 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 SCHIP1Q9P0W5 487 aaPredicted RBP11.36□□□□□ -0.59
PRDM1-201ENST00000369089 RNF14Q9UBS8 474 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 ZFYVE9O95405 1425 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 MYO5CQ9NQX4 1742 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 VHLP40337 213 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 CACNA2D1P54289 1103 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 ANKRD20A2Q5SQ80 823 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 ANKRD20A1Q5TYW2 823 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 KCNV1Q6PIU1 500 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 PEX5LQ8IYB4 626 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 TTLL11Q8NHH1 800 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 PPP1R14CQ8TAE6 165 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRDM1-201ENST00000369089 NFU1Q9UMS0 254 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 DMRT2Q9Y5R5 561 aa11.36□□□□□ -0.59
PRDM1-201ENST00000369089 IGF2BP3O00425 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRDM1-201ENST00000369089 IFIH1Q9BYX4 1025 aaKnown RBP11.36□□□□□ -0.59
PRDM1-201ENST00000369089 PSMA7O14818 248 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 SLC7A5Q01650 507 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 TRPC3Q13507 836 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 IRGCQ6NXR0 463 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 AGGF1Q8N302 714 aaeCLIP11.35□□□□□ -0.59
PRDM1-201ENST00000369089 CCT7Q99832 543 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 BCAP29Q9UHQ4 241 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 KCNH3Q9ULD8 1083 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 MAP3K2Q9Y2U5 619 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 PIK3R4Q99570 1358 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 CETN2P41208 172 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ELF3P78545 371 aaPredicted RBP11.35□□□□□ -0.59
PRDM1-201ENST00000369089 BLMHQ13867 455 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ME3Q16798 604 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 KRT24Q2M2I5 525 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ANO1Q5XXA6 986 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ZNF449Q6P9G9 518 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 TSG101Q99816 390 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 BPIFA3Q9BQP9 254 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 BOLA2Q9H3K6 86 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 A0A087WWV3 80 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 A0A087WZG4 1122 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 A0A1W2PQ27 194 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 A0A1W2PQ64 194 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 A0A1W2PQD8 194 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ARHGAP42A6NI28 874 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 MAPK13O15264 365 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 CCDC166P0CW27 439 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 RFC5P40937 340 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 TUBA1BP68363 451 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
PRDM1-201ENST00000369089 TUBA1AQ71U36 451 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 TRMT44Q8IYL2 757 aaKnown RBP11.35□□□□□ -0.59
PRDM1-201ENST00000369089 DDHD1Q8NEL9 900 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 CLIC6Q96NY7 704 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 YEATS2Q9ULM3 1422 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 SERPINI2O75830 405 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 CASP14P31944 242 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 SERPINB8P50452 374 aa11.35□□□□□ -0.59
PRDM1-201ENST00000369089 R3HDM1Q15032 1099 aaKnown RBP11.35□□□□□ -0.59
PRDM1-201ENST00000369089 ZCWPW2Q504Y3 356 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms