RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 PPP2R3AQ06190 1150 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 WHAMMP3Q1A5X7 153 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 SLC35G1Q2M3R5 365 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 GRIPAP1Q4V328 841 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 HSP90AA4PQ58FG1 418 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 TTI2Q6NXR4 508 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 USP17L2Q6R6M4 530 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 TMCO3Q6UWJ1 677 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 DPP8Q6V1X1 898 aaPredicted RBP11.44□□□□□ -0.58
TPM3-209ENST00000368527 TOGARAM2Q6ZUX3 1019 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 UNC13DQ70J99 1090 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 KRT27Q7Z3Y8 459 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 CCDC84Q86UT8 332 aaPredicted RBP11.44□□□□□ -0.58
TPM3-209ENST00000368527 PROM2Q8N271 834 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 CSGALNACT2Q8N6G5 542 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 RASGRP4Q8TDF6 673 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 MTMR9Q96QG7 549 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 PIGSQ96S52 555 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 DNAJC7Q99615 494 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 HAUS4Q9H6D7 363 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 CDK5RAP2Q96SN8 1893 aa11.44□□□□□ -0.58
TPM3-209ENST00000368527 USP17L5A8MUK1 530 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 CCT6AP40227 531 aaKnown RBP11.43□□□□□ -0.58
TPM3-209ENST00000368527 USP11P51784 963 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 ASIC1P78348 528 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 DDR1Q08345 913 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 PDE4DQ08499 809 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 AP3B2Q13367 1082 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 TXNRD1Q16881 649 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 ZSCAN29Q8IWY8 852 aaPredicted RBP11.43□□□□□ -0.58
TPM3-209ENST00000368527 SMYD4Q8IYR2 804 aaPredicted RBP11.43□□□□□ -0.58
TPM3-209ENST00000368527 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
TPM3-209ENST00000368527 ZNF507Q8TCN5 953 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 MKL1Q969V6 931 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 KIFC2Q96AC6 838 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 MTMR8Q96EF0 704 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 MASTLQ96GX5 879 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 RPGRIP1Q96KN7 1286 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 ZDHHC15Q96MV8 337 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 ERGIC2Q96RQ1 377 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 TSG101Q99816 390 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 GBP3Q9H0R5 595 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 NUCKS1Q9H1E3 243 aaKnown RBP11.43□□□□□ -0.58
TPM3-209ENST00000368527 VPS16Q9H269 839 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 USP40Q9NVE5 1235 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 FAM53CQ9NYF3 392 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 NYAP2Q9P242 653 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 CDC23Q9UJX2 597 aa11.43□□□□□ -0.58
TPM3-209ENST00000368527 COL2A1P02458 1487 aaPredicted RBP11.43□□□□□ -0.58
TPM3-209ENST00000368527 ZBTB5O15062 677 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 PLSCR1O15162 318 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 GNA14O95837 355 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 GOLGA8HP0CJ92 632 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 MCM3P25205 808 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 CASP1P29466 404 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 FXR1P51114 621 aaKnown RBP eCLIP11.42□□□□□ -0.58
TPM3-209ENST00000368527 ZBED6P86452 979 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 BRD3Q15059 726 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 MEA1Q16626 185 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 ERCC6LQ2NKX8 1250 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 HYIQ5T013 277 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 CC2D2BQ6DHV5 1058 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 CENPPQ6IPU0 288 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 FBXO38Q6PIJ6 1188 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 RAD9BQ6WBX8 426 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 SRGAP1Q7Z6B7 1085 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 LARP4BQ92615 738 aaKnown RBP11.42□□□□□ -0.58
TPM3-209ENST00000368527 STAMQ92783 540 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 NAPGQ99747 312 aaPredicted RBP11.42□□□□□ -0.58
TPM3-209ENST00000368527 TUBGCP2Q9BSJ2 902 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 CARD6Q9BX69 1037 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 TSGA10Q9BZW7 698 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 KANSL2Q9H9L4 492 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 GDAQ9Y2T3 454 aa11.42□□□□□ -0.58
TPM3-209ENST00000368527 EPN1Q9Y6I3 576 aaPredicted RBP11.42□□□□□ -0.58
TPM3-209ENST00000368527 SOWAHDA6NJG2 315 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 TBX3O15119 743 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 MARCH6O60337 910 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 ERLIN1O75477 346 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 FOSP01100 380 aaPredicted RBP11.41□□□□□ -0.58
TPM3-209ENST00000368527 MTIF2P46199 727 aaKnown RBP11.41□□□□□ -0.58
TPM3-209ENST00000368527 CLK2P49760 499 aaKnown RBP11.41□□□□□ -0.58
TPM3-209ENST00000368527 C1QBPQ07021 282 aaKnown RBP11.41□□□□□ -0.58
TPM3-209ENST00000368527 SLC4A8Q2Y0W8 1093 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 TMEM119Q4V9L6 283 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 STRIP1Q5VSL9 837 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 STYK1Q6J9G0 422 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 RSRC2Q7L4I2 434 aaKnown RBP11.41□□□□□ -0.58
TPM3-209ENST00000368527 IRF2BP1Q8IU81 584 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 SLFN12Q8IYM2 578 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 MSL3Q8N5Y2 521 aaKnown RBP11.41□□□□□ -0.58
TPM3-209ENST00000368527 CPLX3Q8WVH0 158 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 RAD54LQ92698 747 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 GPR101Q96P66 508 aaPredicted RBP11.41□□□□□ -0.58
TPM3-209ENST00000368527 IDI2Q9BXS1 227 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 TRIM34Q9BYJ4 488 aa11.41□□□□□ -0.58
TPM3-209ENST00000368527 QTRT2Q9H974 415 aaKnown RBP11.41□□□□□ -0.58
TPM3-209ENST00000368527 CYP3A7-CYP3A51PA0A087WV96 503 aa11.4□□□□□ -0.58
TPM3-209ENST00000368527 CCDC151A5D8V7 595 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms