RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 GRIK5Q16478 980 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 SPTY2D1Q68D10 685 aaPredicted RBP16.48■□□□□ 0.23
PRKN-204ENST00000366896 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 CCDC102AQ96A19 550 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 NSUN4Q96CB9 384 aaKnown RBP16.48■□□□□ 0.23
PRKN-204ENST00000366896 NAPGQ99747 312 aaPredicted RBP16.48■□□□□ 0.23
PRKN-204ENST00000366896 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
PRKN-204ENST00000366896 YDJCA8MPS7 323 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
PRKN-204ENST00000366896 MYL1P05976 194 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 ERVK-24P63145 666 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
PRKN-204ENST00000366896 RASSF7Q02833 373 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 TTC31Q49AM3 519 aaPredicted RBP16.47■□□□□ 0.23
PRKN-204ENST00000366896 MFSD14BQ5SR56 506 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 VPS16Q9H269 839 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 YY1AP1Q9H869 796 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 DCP1AQ9NPI6 582 aaPredicted RBP16.47■□□□□ 0.23
PRKN-204ENST00000366896 TAB2Q9NYJ8 693 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 PSME4Q14997 1843 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 LRRIQ3A6PVS8 624 aaPredicted RBP16.47■□□□□ 0.23
PRKN-204ENST00000366896 CORO7P57737 925 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 WDR93Q6P2C0 686 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 CYP26C1Q6V0L0 522 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 PACS2Q86VP3 889 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 ABHD10Q9NUJ1 306 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
PRKN-204ENST00000366896 MAPK8IP1Q9UQF2 711 aa16.47■□□□□ 0.23
PRKN-204ENST00000366896 LDHBP07195 334 aaKnown RBP16.46■□□□□ 0.23
PRKN-204ENST00000366896 KIF5BP33176 963 aa16.46■□□□□ 0.23
PRKN-204ENST00000366896 COPB1P53618 953 aaKnown RBP16.46■□□□□ 0.23
PRKN-204ENST00000366896 CRNKL1Q9BZJ0 848 aaKnown RBP16.46■□□□□ 0.23
PRKN-204ENST00000366896 GDAQ9Y2T3 454 aa16.46■□□□□ 0.23
PRKN-204ENST00000366896 H7C1D1 291 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 N4BP3O15049 544 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 PRELPP51888 382 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 TCP11X2Q5H9J9 407 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 STRIP1Q5VSL9 837 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 CERS5Q8N5B7 392 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 C4orf32Q8N8J7 132 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 NELFBQ8WX92 580 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 ANKS1AQ92625 1134 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 ZBTB9Q96C00 473 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 FAM204AQ9H8W3 233 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 VIPAS39Q9H9C1 493 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 LAMB1P07942 1786 aa16.46■□□□□ 0.22
PRKN-204ENST00000366896 YBX3P16989 372 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRKN-204ENST00000366896 NIM1KQ8IY84 436 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 GPKOWQ92917 476 aaPredicted RBP eCLIP16.45■□□□□ 0.22
PRKN-204ENST00000366896 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 USP17L3A6NCW0 530 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 USP17L4A6NCW7 530 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 PHACTR2O75167 634 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 AARSP49588 968 aaKnown RBP eCLIP16.45■□□□□ 0.22
PRKN-204ENST00000366896 AMPD2Q01433 879 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 KCNB1Q14721 858 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 DACT2Q5SW24 774 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 RCSD1Q6JBY9 416 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 USP17L1Q7RTZ2 530 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 NOA1Q8NC60 698 aaKnown RBP16.45■□□□□ 0.22
PRKN-204ENST00000366896 RASGRP4Q8TDF6 673 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 PPM1EQ8WY54 764 aa16.45■□□□□ 0.22
PRKN-204ENST00000366896 SRCAPQ6ZRS2 3230 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 A0A1W2PQC6 194 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 KCNJ18B7U540 433 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 RPN1P04843 607 aaKnown RBP16.44■□□□□ 0.22
PRKN-204ENST00000366896 GTF2A1P52655 376 aaPredicted RBP16.44■□□□□ 0.22
PRKN-204ENST00000366896 KCNJ12Q14500 433 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 GALNT17Q6IS24 598 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 ARHGAP27Q6ZUM4 889 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 DZIP1Q86YF9 867 aaKnown RBP16.44■□□□□ 0.22
PRKN-204ENST00000366896 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 ZNRF3Q9ULT6 936 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 PPFIA4O75335 1185 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 ARHGAP25P42331 645 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 FKBP1AP62942 108 aaKnown RBP16.44■□□□□ 0.22
PRKN-204ENST00000366896 ZNF662Q6ZS27 426 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 DGKHQ86XP1 1220 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 SUGT1Q9Y2Z0 365 aa16.44■□□□□ 0.22
PRKN-204ENST00000366896 TSPY2A6NKD2 308 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 PRCPP42785 496 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 CCDC178Q5BJE1 867 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 DAGLBQ8NCG7 672 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
PRKN-204ENST00000366896 MYO6Q9UM54 1294 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 JRKLQ9Y4A0 524 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 TRIM49BA6NDI0 452 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 PP2D1A8MPX8 630 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 LAD1O00515 517 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 RNF40O75150 1001 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 PRPF6O94906 941 aaKnown RBP16.43■□□□□ 0.22
PRKN-204ENST00000366896 SYF2O95926 243 aaKnown RBP16.43■□□□□ 0.22
PRKN-204ENST00000366896 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 ADSSL1Q8N142 457 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 PCDHA4Q9UN74 947 aa16.43■□□□□ 0.22
PRKN-204ENST00000366896 M0R2N6 131 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 EEF1GP26641 437 aaKnown RBP16.42■□□□□ 0.22
PRKN-204ENST00000366896 GNAQP50148 359 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 TYW1BQ6NUM6 668 aa16.42■□□□□ 0.22
PRKN-204ENST00000366896 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms