RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 PRICKLE3O43900 615 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 NPHS1O60500 1241 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 PAMP19021 973 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 TACR1P25103 407 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 SARSP49591 514 aaKnown RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 GRB10Q13322 594 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 MRPL58Q14197 206 aaKnown RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 HEATR6Q6AI08 1181 aaKnown RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 POMZP3Q6PJE2 187 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 HHIPL2Q6UWX4 724 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ADGRG2Q8IZP9 1017 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 CARFQ8N187 725 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 TTC9BQ8N6N2 239 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 TP53I13Q8NBR0 393 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 TMEM52Q8NDY8 209 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 GIPC2Q8TF65 315 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 DDX1Q92499 740 aaKnown RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 DDX11Q96FC9 970 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 FCRL3Q96P31 734 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 AP5M1Q9H0R1 490 aa3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 NOL6Q9H6R4 1146 aaKnown RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ZNF214Q9UL59 606 aaPredicted RBP3.18□□□□□ -1.9
RNU6-1048P-201ENST00000364054 A0A1B0GTL3 188 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 C9IYK1 514 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 SHOXO15266 292 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 CYP7B1O75881 506 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 TP53P04637 393 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ASGR2P07307 311 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 GLI4P10075 376 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 CYP2C8P10632 490 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 FBLN1P23142 703 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 CNR2P34972 360 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 MAGEA10P43363 369 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 HTRA3P83110 453 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 AMPD2Q01433 879 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 CACNB2Q08289 660 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 SURF1Q15526 300 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 GNPTABQ3T906 1256 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 VWA3BQ502W6 1294 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 AXDND1Q5T1B0 1012 aaPredicted RBP3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 DCAF15Q66K64 600 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 UNC5AQ6ZN44 842 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ADAT2Q7Z6V5 191 aaKnown RBP3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 DCP2Q8IU60 420 aaKnown RBP3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 LGI4Q8N135 537 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 C19orf47Q8N9M1 422 aaKnown RBP3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 BRF1Q92994 677 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ZDHHC15Q96MV8 337 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 SAMD11Q96NU1 681 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 SMPD4Q9NXE4 827 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 SRRDQ9UH36 339 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 BACE2Q9Y5Z0 518 aa3.17□□□□□ -1.9
RNU6-1048P-201ENST00000364054 NPHP3-ACAD11A0A0J9YXS1 232 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 AURKAO14965 403 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ACRP10323 421 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ZXDAP98168 799 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 SLC7A5Q01650 507 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 TDRD10Q5VZ19 366 aaKnown RBP3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 PLEKHH3Q7Z736 793 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 TTLL6Q8N841 843 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 CHST13Q8NET6 341 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 RCC1LQ96I51 464 aaKnown RBP3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 LOXL4Q96JB6 756 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 HAUS7Q99871 368 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 LNPKQ9C0E8 428 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 GZF1Q9H116 711 aaPredicted RBP3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ZNF451Q9Y4E5 1061 aa3.16□□□□□ -1.9
RNU6-1048P-201ENST00000364054 ADAMTS20P59510 1910 aa3.15□□□□□ -1.9
RNU6-1048P-201ENST00000364054 C2orf71A6NGG8 1288 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 NOBOXO60393 691 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 ITGB3P05106 788 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 ATF2P15336 505 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 PMLP29590 882 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 EIF6P56537 245 aaKnown RBP3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 TAGLNQ01995 201 aaKnown RBP3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 PPP2R5DQ14738 602 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 FAM26FQ5R3K3 315 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 CPZQ66K79 652 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 WWC2Q6AWC2 1192 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 IQCEQ6IPM2 695 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 ETV3LQ6ZN32 361 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 USP51Q70EK9 711 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 ZNF654Q8IZM8 581 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 SMARCC2Q8TAQ2 1214 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 ZNF526Q8TF50 670 aaPredicted RBP3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 WRNIP1Q96S55 665 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 CDK5RAP1Q96SZ6 601 aaKnown RBP3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 YIPF4Q9BSR8 244 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 FAM86C1Q9NVL1 165 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 SUGT1Q9Y2Z0 365 aa3.15□□□□□ -1.91
RNU6-1048P-201ENST00000364054 C1QTNF3-AMACRE9PGA6 284 aa3.14□□□□□ -1.91
RNU6-1048P-201ENST00000364054 NOP56O00567 594 aaKnown RBP3.14□□□□□ -1.91
RNU6-1048P-201ENST00000364054 SUV39H1O43463 412 aa3.14□□□□□ -1.91
RNU6-1048P-201ENST00000364054 PLATP00750 562 aa3.14□□□□□ -1.91
RNU6-1048P-201ENST00000364054 FSHBP01225 129 aa3.14□□□□□ -1.91
RNU6-1048P-201ENST00000364054 PLA2G1BP04054 148 aaKnown RBP3.14□□□□□ -1.91
RNU6-1048P-201ENST00000364054 IFNGR1P15260 489 aa3.14□□□□□ -1.91
RNU6-1048P-201ENST00000364054 RPL13P26373 211 aaKnown RBP3.14□□□□□ -1.91
RNU6-1048P-201ENST00000364054 MC3RP41968 323 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms