RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 EMILIN1Q9Y6C2 1016 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 DLC1Q96QB1 1528 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 RFX7Q2KHR2 1363 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 CRB1P82279 1406 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 PRPF3O43395 683 aaKnown RBP12.76□□□□□ -0.37
CNOT4-203ENST00000361528 NCALDP61601 193 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 HERVK_113P62684 666 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 PRPF4BQ13523 1007 aaKnown RBP12.76□□□□□ -0.37
CNOT4-203ENST00000361528 USH1GQ495M9 461 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 ERMARDQ5T6L9 678 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 BICDL1Q6ZP65 573 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 LINS1Q8NG48 757 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 RPS6KC1Q96S38 1066 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 TIPINQ9BVW5 301 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 FAM129AQ9BZQ8 928 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
CNOT4-203ENST00000361528 LUC7LQ9NQ29 371 aaKnown RBP12.76□□□□□ -0.37
CNOT4-203ENST00000361528 ATP8A2Q9NTI2 1148 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 SAMD15Q9P1V8 674 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 ZRANB1Q9UGI0 708 aa12.76□□□□□ -0.37
CNOT4-203ENST00000361528 MAP3K13O43283 966 aa12.75□□□□□ -0.37
CNOT4-203ENST00000361528 KRT9P35527 623 aa12.75□□□□□ -0.37
CNOT4-203ENST00000361528 CYLC1P35663 651 aaPredicted RBP12.75□□□□□ -0.37
CNOT4-203ENST00000361528 SPAG1Q07617 926 aa12.75□□□□□ -0.37
CNOT4-203ENST00000361528 TRMT44Q8IYL2 757 aaKnown RBP12.75□□□□□ -0.37
CNOT4-203ENST00000361528 TEKT1Q969V4 418 aa12.75□□□□□ -0.37
CNOT4-203ENST00000361528 MED15Q96RN5 788 aa12.75□□□□□ -0.37
CNOT4-203ENST00000361528 PDP2Q9P2J9 529 aa12.75□□□□□ -0.37
CNOT4-203ENST00000361528 DDX25Q9UHL0 483 aaKnown RBP12.75□□□□□ -0.37
CNOT4-203ENST00000361528 DAAM1Q9Y4D1 1078 aa12.75□□□□□ -0.37
CNOT4-203ENST00000361528 PHF20L1A8MW92 1017 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 PFDN1O60925 122 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 POLR3DP05423 398 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 RARAP10276 462 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 SESN3P58005 492 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 KCNJ2P63252 427 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 SLC7A5Q01650 507 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 CBX3Q13185 183 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 CEP128Q6ZU80 1094 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 FBXL16Q8N461 479 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 STKLD1Q8NE28 680 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 SH3TC2Q8TF17 1288 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 ZNF653Q96CK0 615 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 FAM81BQ96LP2 452 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 RAB3IPQ96QF0 476 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 XPO6Q96QU8 1125 aaKnown RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 ARPC5LQ9BPX5 153 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 MIS12Q9H081 205 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 BRD8Q9H0E9 1235 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 POLD4Q9HCU8 107 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 DLGAP2Q9P1A6 1054 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 LIMA1Q9UHB6 759 aaKnown RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 HYOU1Q9Y4L1 999 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 IGF2BP3O00425 579 aaKnown RBP eCLIP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 CALB2P22676 271 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 GSTT1P30711 240 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 SKIV2L2P42285 1042 aaKnown RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 GALNTL6Q49A17 601 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 ODF2Q5BJF6 829 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 RNF220Q5VTB9 566 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 ZNF317Q96PQ6 595 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 MTRQ99707 1265 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 BARX2Q9UMQ3 279 aaPredicted RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 NFU1Q9UMS0 254 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 ATP8A1Q9Y2Q0 1164 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 COMMD3-BMI1R4GMX3 469 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 SYNRGQ9UMZ2 1314 aa12.74□□□□□ -0.37
CNOT4-203ENST00000361528 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
CNOT4-203ENST00000361528 TACC1O75410 805 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 RFC5P40937 340 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 PEX5P50542 639 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 COPS2P61201 443 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-203ENST00000361528 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 MTMR3Q13615 1198 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 GALNT17Q6IS24 598 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 RSPH1Q8WYR4 309 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 KLHL29Q96CT2 875 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 CORO1BQ9BR76 489 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 ECT2Q9H8V3 914 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 RNPEPL1Q9HAU8 725 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 ARHGEF10LQ9HCE6 1279 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 CEP126Q9P2H0 1117 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 POGZQ7Z3K3 1410 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 A0A0G2JS52 829 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 H0YGN5 161 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 TMOD1P28289 359 aa12.73□□□□□ -0.37
CNOT4-203ENST00000361528 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
CNOT4-203ENST00000361528 PDIA3P30101 505 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms