RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 ARMT1Q9H993 441 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 WDR7Q9Y4E6 1490 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 CACTINQ8WUQ7 758 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 REXO1Q8N1G1 1221 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 PIK3R5Q8WYR1 880 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 GFM2Q969S9 779 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 HACD3Q9P035 362 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 CPA1P15085 419 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 ATP8B2P98198 1209 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 GRAMD1BQ3KR37 738 aa18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 ALKBH8Q96BT7 664 aaKnown RBP18.79■□□□□ 0.6
CACNA1A-201ENST00000360228 ANKRD44Q8N8A2 993 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 NT5C3AQ9H0P0 336 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 RAPGEF5Q92565 580 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 TRPC5Q9UL62 973 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 TESPA1A2RU30 521 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 NSFP46459 744 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 STAMQ92783 540 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 CFAP36Q96G28 342 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 PANK4Q9NVE7 773 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 RTEL1Q9NZ71 1219 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 ENOX1Q8TC92 643 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 FGFR1OP2Q9NVK5 253 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 NSD2O96028 1365 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 LZTS2Q9BRK4 669 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 ADPGKQ9BRR6 497 aa18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 CPSF3Q9UKF6 684 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-201ENST00000360228 WASLO00401 505 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 E2F6O75461 281 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 ACTN1P12814 892 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 MSH2P43246 934 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 SAAL1Q96ER3 474 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 SYTL2Q9HCH5 934 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 N4BP1O75113 896 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 IL16Q14005 1332 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 WARS2Q9UGM6 360 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 DBNLQ9UJU6 430 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 EIF2AK4Q9P2K8 1649 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 MSH6P52701 1360 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 UFL1O94874 794 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 PRKG1Q13976 671 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 RINLQ6ZS11 566 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 KRT25Q7Z3Z0 450 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 PPM1KQ8N3J5 372 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 ZFYVE19Q96K21 471 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 KCNG1Q9UIX4 513 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 SYNDIG1LA6NDD5 238 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 MCF2LO15068 1137 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 DDIT3P35638 169 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 TRIM67Q6ZTA4 783 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 TTC25Q96NG3 672 aa18.77■□□□□ 0.6
CACNA1A-201ENST00000360228 ABCC5O15440 1437 aa18.77■□□□□ 0.59
CACNA1A-201ENST00000360228 THOC5Q13769 683 aaKnown RBP18.77■□□□□ 0.59
CACNA1A-201ENST00000360228 RAPGEF3O95398 923 aa18.77■□□□□ 0.59
CACNA1A-201ENST00000360228 ZBTB8OSQ8IWT0 167 aa18.77■□□□□ 0.59
CACNA1A-201ENST00000360228 GIPC2Q8TF65 315 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 SNX19Q92543 992 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 BCL2L12Q9HB09 334 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 H0YC42 278 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 PTPREP23469 700 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 HIF1AQ16665 826 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 FRA10AC1Q70Z53 315 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 SLC27A2O14975 620 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 SEPT2Q15019 361 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 SPOPLQ6IQ16 392 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 BBS5Q8N3I7 341 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 DYDC2Q96IM9 177 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 XPO4Q9C0E2 1151 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 IFNA8P32881 189 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 ABHD8Q96I13 439 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 PCDHB4Q9Y5E5 795 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 WDR91A4D1P6 747 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 SOX5P35711 763 aa18.76■□□□□ 0.59
CACNA1A-201ENST00000360228 hCG_1642624A0A1W2PR95 340 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 EFCAB8A8MWE9 144 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 APOA1P02647 267 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 NBPF10Q6P3W6 841 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 SBNO1A3KN83 1393 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 IBTKQ9P2D0 1353 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 TLK1Q9UKI8 766 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 NSMFQ6X4W1 530 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 TRAPPC10P48553 1259 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 CARSP49589 748 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 KCNA1Q09470 495 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 RSRC2Q7L4I2 434 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 PCGF5Q86SE9 256 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 CCNYQ8ND76 341 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 OR8K1Q8NGG5 319 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 C8orf37Q96NL8 207 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 TJAP1Q5JTD0 557 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 TUBB6Q9BUF5 446 aa18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 PPHLN1Q8NEY8 458 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-201ENST00000360228 CHMLP26374 656 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 KPNA2P52292 529 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 POLGP54098 1239 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 ARHGEF18Q6ZSZ5 1173 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 PCDHB15Q9Y5E8 787 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms