RNA–Protein interactions for RNA: ENST00000359984.12

CLN3-205, Transcript of CLN3, battenin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-205ENST00000359984 GCOM1H8Y6P7 765 aaPredicted RBP22.7■■□□□ 1.22
CLN3-205ENST00000359984 PDHXO00330 501 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 SLC10A3P09131 477 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 POLR2MP0CAP2 368 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 STAT3P40763 770 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 PLS1Q14651 629 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 ZNF174Q15697 407 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 ANKRD23Q86SG2 305 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 PTPN18Q99952 460 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 SLC45A1Q9Y2W3 748 aa22.7■■□□□ 1.22
CLN3-205ENST00000359984 SPTLC2O15270 562 aa22.69■■□□□ 1.22
CLN3-205ENST00000359984 PTMSP20962 102 aa22.69■■□□□ 1.22
CLN3-205ENST00000359984 AP3B2Q13367 1082 aa22.69■■□□□ 1.22
CLN3-205ENST00000359984 MCTP2Q6DN12 878 aa22.69■■□□□ 1.22
CLN3-205ENST00000359984 RNF146Q9NTX7 359 aa22.69■■□□□ 1.22
CLN3-205ENST00000359984 PNMA3Q9UL41 463 aa22.69■■□□□ 1.22
CLN3-205ENST00000359984 TESPA1A2RU30 521 aaPredicted RBP22.68■■□□□ 1.22
CLN3-205ENST00000359984 CNMDO75829 334 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 FOSP01100 380 aaPredicted RBP22.68■■□□□ 1.22
CLN3-205ENST00000359984 MCF2L2Q86YR7 1114 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 FAM43AQ8N2R8 423 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 KCNG4Q8TDN1 519 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 ANO3Q9BYT9 981 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 A0A0G2JMZ2 1700 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 EDIL3O43854 480 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 CYP2C8P10632 490 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 HSD17B4P51659 736 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 TKFCQ3LXA3 575 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 NEK8Q86SG6 692 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 PAGR1Q9BTK6 254 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 RBPJLQ9UBG7 517 aa22.68■■□□□ 1.22
CLN3-205ENST00000359984 DEKP35659 375 aaKnown RBP22.67■■□□□ 1.22
CLN3-205ENST00000359984 GHRHRQ02643 423 aa22.67■■□□□ 1.22
CLN3-205ENST00000359984 FCHSD1Q86WN1 690 aa22.67■■□□□ 1.22
CLN3-205ENST00000359984 HHIPL1Q96JK4 782 aa22.67■■□□□ 1.22
CLN3-205ENST00000359984 TXNRD2Q9NNW7 524 aa22.67■■□□□ 1.22
CLN3-205ENST00000359984 CEP131Q9UPN4 1083 aa22.67■■□□□ 1.22
CLN3-205ENST00000359984 MANSC4A6NHS7 340 aaPredicted RBP22.66■■□□□ 1.22
CLN3-205ENST00000359984 SPDYE3A6NKU9 549 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 FAM155AB1AL88 458 aaPredicted RBP22.66■■□□□ 1.22
CLN3-205ENST00000359984 MARCKSP29966 332 aaPredicted RBP22.66■■□□□ 1.22
CLN3-205ENST00000359984 MCM7P33993 719 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 LETM2Q2VYF4 491 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 SPATC1LQ9H0A9 340 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 ME1P48163 572 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 UBE2HP62256 183 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 TPRNQ4KMQ1 711 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 RIOX2Q8IUF8 465 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 CCDC102AQ96A19 550 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 PCDHA7Q9UN72 937 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 RABGAP1Q9Y3P9 1069 aa22.66■■□□□ 1.22
CLN3-205ENST00000359984 PPP6R2O75170 966 aa22.65■■□□□ 1.22
CLN3-205ENST00000359984 SAMD3Q8N6K7 520 aa22.65■■□□□ 1.22
CLN3-205ENST00000359984 MRVI1Q9Y6F6 885 aa22.65■■□□□ 1.22
CLN3-205ENST00000359984 BMP15O95972 392 aa22.64■■□□□ 1.22
CLN3-205ENST00000359984 CRYGNQ8WXF5 182 aa22.64■■□□□ 1.22
CLN3-205ENST00000359984 ACAD9Q9H845 621 aa22.64■■□□□ 1.22
CLN3-205ENST00000359984 MAP3K20Q9NYL2 800 aaKnown RBP22.64■■□□□ 1.22
CLN3-205ENST00000359984 COL20A1Q9P218 1284 aa22.64■■□□□ 1.22
CLN3-205ENST00000359984 CCNT1O60563 726 aaKnown RBP22.64■■□□□ 1.21
CLN3-205ENST00000359984 SREBF1P36956 1147 aa22.64■■□□□ 1.21
CLN3-205ENST00000359984 RPS6P62753 249 aaKnown RBP22.64■■□□□ 1.21
CLN3-205ENST00000359984 PTGDRQ13258 359 aa22.64■■□□□ 1.21
CLN3-205ENST00000359984 Q3C1V9 767 aa22.64■■□□□ 1.21
CLN3-205ENST00000359984 NSMFQ6X4W1 530 aa22.64■■□□□ 1.21
CLN3-205ENST00000359984 C4orf32Q8N8J7 132 aa22.64■■□□□ 1.21
CLN3-205ENST00000359984 CHST13Q8NET6 341 aa22.64■■□□□ 1.21
CLN3-205ENST00000359984 GPT2Q8TD30 523 aa22.64■■□□□ 1.21
CLN3-205ENST00000359984 SMCR8Q8TEV9 937 aaPredicted RBP22.64■■□□□ 1.21
CLN3-205ENST00000359984 GTF3C2Q8WUA4 911 aaPredicted RBP22.64■■□□□ 1.21
CLN3-205ENST00000359984 MOV10L1Q9BXT6 1211 aaKnown RBP22.64■■□□□ 1.21
CLN3-205ENST00000359984 MORC2Q9Y6X9 1032 aaPredicted RBP22.64■■□□□ 1.21
CLN3-205ENST00000359984 TRAK2O60296 914 aa22.63■■□□□ 1.21
CLN3-205ENST00000359984 USP11P51784 963 aa22.63■■□□□ 1.21
CLN3-205ENST00000359984 ARHGAP4P98171 946 aa22.63■■□□□ 1.21
CLN3-205ENST00000359984 SLC30A10Q6XR72 485 aa22.63■■□□□ 1.21
CLN3-205ENST00000359984 RNF207Q6ZRF8 634 aa22.63■■□□□ 1.21
CLN3-205ENST00000359984 JMYQ8N9B5 988 aa22.63■■□□□ 1.21
CLN3-205ENST00000359984 SYTL5Q8TDW5 730 aaPredicted RBP22.63■■□□□ 1.21
CLN3-205ENST00000359984 GOLGA6L4A6NEF3 574 aa22.62■■□□□ 1.21
CLN3-205ENST00000359984 IGF2BP3O00425 579 aaKnown RBP eCLIP22.62■■□□□ 1.21
CLN3-205ENST00000359984 ATP2C1P98194 919 aaPredicted RBP22.62■■□□□ 1.21
CLN3-205ENST00000359984 BAATQ14032 418 aaPredicted RBP22.62■■□□□ 1.21
CLN3-205ENST00000359984 AXDND1Q5T1B0 1012 aaPredicted RBP22.62■■□□□ 1.21
CLN3-205ENST00000359984 DDX49Q9Y6V7 483 aaKnown RBP22.62■■□□□ 1.21
CLN3-205ENST00000359984 TDP2O95551 362 aa22.62■■□□□ 1.21
CLN3-205ENST00000359984 PARK7Q99497 189 aaKnown RBP22.62■■□□□ 1.21
CLN3-205ENST00000359984 TMEM60Q9H2L4 133 aa22.62■■□□□ 1.21
CLN3-205ENST00000359984 FBXO2Q9UK22 296 aaPredicted RBP22.62■■□□□ 1.21
CLN3-205ENST00000359984 PTPREP23469 700 aa22.61■■□□□ 1.21
CLN3-205ENST00000359984 ERVK-9P63128 1117 aa22.61■■□□□ 1.21
CLN3-205ENST00000359984 ERVK-24P63145 666 aa22.61■■□□□ 1.21
CLN3-205ENST00000359984 ADALQ6DHV7 355 aa22.61■■□□□ 1.21
CLN3-205ENST00000359984 PPP4R3AQ6IN85 833 aa22.61■■□□□ 1.21
CLN3-205ENST00000359984 NCAPG2Q86XI2 1143 aa22.61■■□□□ 1.21
CLN3-205ENST00000359984 A1CFQ9NQ94 594 aaKnown RBP22.61■■□□□ 1.21
CLN3-205ENST00000359984 MYH7BA7E2Y1 1941 aa22.61■■□□□ 1.21
CLN3-205ENST00000359984 SLC25A27O95847 323 aa22.6■■□□□ 1.21
CLN3-205ENST00000359984 GCLCP48506 637 aaPredicted RBP22.6■■□□□ 1.21
CLN3-205ENST00000359984 INHBEP58166 350 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms