RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TFCP2L1Q9NZI6 479 aa19.73■□□□□ 0.75
RTN4-204ENST00000357732 CLSTN1O94985 981 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 TCP1P17987 556 aaKnown RBP19.72■□□□□ 0.75
RTN4-204ENST00000357732 PLCG1P19174 1290 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 INF2Q27J81 1249 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 ANKRD40Q6AI12 368 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 TYW1BQ6NUM6 668 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 LINC00116Q8NCU8 138 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 SPZ1Q9BXG8 430 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 EDEM3Q9BZQ6 932 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 JADE2Q9NQC1 790 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 IL17RBQ9NRM6 502 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 THRAP3Q9Y2W1 955 aaKnown RBP19.72■□□□□ 0.75
RTN4-204ENST00000357732 A0A0U1RQG5 324 aaPredicted RBP19.72■□□□□ 0.75
RTN4-204ENST00000357732 PP2D1A8MPX8 630 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 SRGAP2O75044 1071 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 PHACTR2O75167 634 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 SMARCA1P28370 1054 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 AENQ8WTP8 325 aaKnown RBP19.72■□□□□ 0.75
RTN4-204ENST00000357732 SMARCC1Q92922 1105 aaPredicted RBP19.72■□□□□ 0.75
RTN4-204ENST00000357732 MCM9Q9NXL9 1143 aa19.72■□□□□ 0.75
RTN4-204ENST00000357732 PALM3A6NDB9 673 aaPredicted RBP19.71■□□□□ 0.75
RTN4-204ENST00000357732 RCCD1A6NED2 376 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 A6NNZ2 444 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 PRDX5P30044 214 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 MAGEA9P43362 315 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 SLC4A8Q2Y0W8 1093 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 TUBB8Q3ZCM7 444 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 CENPPQ6IPU0 288 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 GBP6Q6ZN66 633 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 CAPZA3Q96KX2 299 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 ALS2CR12Q96Q35 445 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 SH2D4AQ9H788 454 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 EFCC1Q9HA90 598 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 LCMT1Q9UIC8 334 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 TNFRSF8P28908 595 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 GNA11P29992 359 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 CERS3Q8IU89 383 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 C10orf67Q8IYJ2 551 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 STAG2Q8N3U4 1231 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 RASGRP4Q8TDF6 673 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 PCMTD1Q96MG8 357 aaPredicted RBP19.71■□□□□ 0.75
RTN4-204ENST00000357732 STK17AQ9UEE5 414 aa19.71■□□□□ 0.75
RTN4-204ENST00000357732 BAZ2BQ9UIF8 2168 aaKnown RBP19.7■□□□□ 0.74
RTN4-204ENST00000357732 PVALEFA0A1B0GWK0 134 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 ASIC1P78348 528 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 NONOQ15233 471 aaKnown RBP eCLIP19.7■□□□□ 0.748e-7■■□□□ 13.4
RTN4-204ENST00000357732 TBC1D9BQ66K14 1250 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 HEATR3Q7Z4Q2 680 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 CREG2Q8IUH2 290 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 ZNF287Q9HBT7 754 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 JAG2Q9Y219 1238 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 GOLGA6BA6NDN3 693 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 FAM76AQ8TAV0 307 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 CALML4Q96GE6 196 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 IFIH1Q9BYX4 1025 aaKnown RBP19.7■□□□□ 0.74
RTN4-204ENST00000357732 TSKSQ9UJT2 592 aa19.7■□□□□ 0.74
RTN4-204ENST00000357732 STK4Q13043 487 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 TXNRD1Q16881 649 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 VWA3BQ502W6 1294 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 TRIM34Q9BYJ4 488 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 C6orf50Q9HD87 102 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 RNF14Q9UBS8 474 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 GOLGA8KD6RF30 607 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 PDE2AO00408 941 aaPredicted RBP19.69■□□□□ 0.74
RTN4-204ENST00000357732 PJA2O43164 708 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 GGCXP38435 758 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 CORO7P57737 925 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 RPS8P62241 208 aaKnown RBP19.69■□□□□ 0.74
RTN4-204ENST00000357732 LRRC63Q05C16 580 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 CCDC96Q2M329 555 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 GLE1Q53GS7 698 aaKnown RBP19.69■□□□□ 0.74
RTN4-204ENST00000357732 EMBQ6PCB8 327 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 DZIP1Q86YF9 867 aaKnown RBP19.69■□□□□ 0.74
RTN4-204ENST00000357732 NYXQ9GZU5 481 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 SIK3Q9Y2K2 1263 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 HYOU1Q9Y4L1 999 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 PCDHA13Q9Y5I0 950 aa19.69■□□□□ 0.74
RTN4-204ENST00000357732 KDM4FA0A1W2PPD8 638 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 hCG_1984214I3L0E3 225 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 CYTH3O43739 400 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 MAN2A1Q16706 1144 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 NEK8Q86SG6 692 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 ZNF713Q8N859 430 aaPredicted RBP19.68■□□□□ 0.74
RTN4-204ENST00000357732 LRRC15Q8TF66 581 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 LRRC27Q9C0I9 530 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 MKNK2Q9HBH9 465 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 LRWD1Q9UFC0 647 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 ESYT2A0FGR8 921 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 MACROD2A1Z1Q3 448 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 AGPSO00116 658 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 OPA1O60313 960 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 TSPY3P0CV98 308 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 TSPY8P0CW00 308 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 GSTO1P78417 241 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 DNAJC21Q5F1R6 531 aaKnown RBP19.68■□□□□ 0.74
RTN4-204ENST00000357732 GUF1Q8N442 669 aaKnown RBP19.68■□□□□ 0.74
RTN4-204ENST00000357732 CCDC24Q8N4L8 307 aa19.68■□□□□ 0.74
RTN4-204ENST00000357732 NUCKS1Q9H1E3 243 aaKnown RBP19.68■□□□□ 0.74
RTN4-204ENST00000357732 ZNF263O14978 683 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms