RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 CTDSPL2Q05D32 466 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 MORC4Q8TE76 937 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 VWCEQ96DN2 955 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 UHRF1Q96T88 793 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 FSD1Q9BTV5 496 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 ADD3Q9UEY8 706 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.1□□□□□ -0.471e-8■□□□□ 9.1
UBE2D3-206ENST00000357194 PCDHA11Q9Y5I1 949 aa12.1□□□□□ -0.47
UBE2D3-206ENST00000357194 ERC2O15083 957 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 ICAM1P05362 532 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 SUPT20HL2P0C7V6 817 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 CYP2C9P11712 490 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 BAATQ14032 418 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 DUSP28Q4G0W2 176 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 DIEXFQ68CQ4 756 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 MICALL1Q8N3F8 863 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 PI4K2BQ8TCG2 481 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 WDR11Q9BZH6 1224 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 TRMT13Q9NUP7 481 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 POLR3EQ9NVU0 708 aa12.09□□□□□ -0.47
UBE2D3-206ENST00000357194 FOXP2O15409 715 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 RANBP6O60518 1105 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 MYL3P08590 195 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 SLC16A2P36021 539 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 ALDH5A1P51649 535 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 PURAQ00577 322 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 TTLL4Q14679 1199 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 CCDC96Q2M329 555 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 TTBK2Q6IQ55 1244 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 DEFB128Q7Z7B8 93 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 RAPGEFL1Q9UHV5 662 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 TNKSO95271 1327 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 SCN5AQ14524 2016 aa12.08□□□□□ -0.48
UBE2D3-206ENST00000357194 TCF20Q9UGU0 1960 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 PTPDC1A2A3K4 754 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 NFIBO00712 420 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 PFKMP08237 780 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 KCNA4P22459 653 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 NOVP48745 357 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 CPT1AP50416 773 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 TFF2Q03403 129 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 TMEM67Q5HYA8 995 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 BTNL9Q6UXG8 535 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 GPHNQ9NQX3 736 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 NCOR1O75376 2440 aa12.07□□□□□ -0.48
UBE2D3-206ENST00000357194 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 RBM47A0AV96 593 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 RFXAPO00287 272 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 CA3P07451 260 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 BMP1P13497 986 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 CALML3P27482 149 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 SKIV2LQ15477 1246 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 OR6J1Q8NGC5 347 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 NECAB3Q96P71 396 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 MTG1Q9BT17 334 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 CERS4Q9HA82 394 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 TOMM22Q9NS69 142 aa12.06□□□□□ -0.48
UBE2D3-206ENST00000357194 ORC4O43929 436 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 FGRP09769 529 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 ACTN1P12814 892 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 POU3F3P20264 500 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 MX1P20591 662 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 AAK1Q2M2I8 961 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 BRDTQ58F21 947 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 SLC30A10Q6XR72 485 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 RNF207Q6ZRF8 634 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 PPP1R13LQ8WUF5 828 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 CLEC4DQ8WXI8 215 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 TMEM47Q9BQJ4 181 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 MTCH2Q9Y6C9 303 aa12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-206ENST00000357194 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 NKRFO15226 690 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 GTPBP6O43824 516 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 IQCF3P0C7M6 154 aa12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 TOP1P11387 765 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 RFC2P35250 354 aa12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 KCNQ1P51787 676 aa12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 RPS6P62753 249 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 PDE4DQ08499 809 aa12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 RRP12Q5JTH9 1297 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-206ENST00000357194 NFRKBQ6P4R8 1299 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms