RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 SLC16A2P36021 539 aa17.05■□□□□ 0.32
PTBP1-203ENST00000356948 GPCPD1Q9NPB8 672 aa17.05■□□□□ 0.32
PTBP1-203ENST00000356948 TBC1D7Q9P0N9 293 aa17.05■□□□□ 0.32
PTBP1-203ENST00000356948 CTAGE15A4D2H0 777 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 RHOBTB3O94955 611 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 CTAGE8P0CG41 777 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
PTBP1-203ENST00000356948 CTAGE6Q86UF2 777 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 CTAGE4Q8IX94 777 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 ANKRD2Q9GZV1 360 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 NHEJ1Q9H9Q4 299 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-203ENST00000356948 MLXIPQ9HAP2 919 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
PTBP1-203ENST00000356948 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 DNAAF5Q86Y56 855 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 CCDC102AQ96A19 550 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 THRAP3Q9Y2W1 955 aaKnown RBP17.04■□□□□ 0.32
PTBP1-203ENST00000356948 MYMKA6NI61 221 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 MTIF2P46199 727 aaKnown RBP17.04■□□□□ 0.32
PTBP1-203ENST00000356948 TMC4Q7Z404 712 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 TEX11Q8IYF3 940 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 CDCA7Q9BWT1 371 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-203ENST00000356948 RMND1Q9NWS8 449 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 LCMT1Q9UIC8 334 aa17.04■□□□□ 0.32
PTBP1-203ENST00000356948 PDS5AQ29RF7 1337 aaKnown RBP17.04■□□□□ 0.32
PTBP1-203ENST00000356948 LOC102724159A0A0B4J2E5 919 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 UFL1O94874 794 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 OR52Z1P0C646 297 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 PWP2Q15269 919 aaKnown RBP17.03■□□□□ 0.32
PTBP1-203ENST00000356948 DNAJC7Q99615 494 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 TTYH3Q9C0H2 523 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 CAPN11Q9UMQ6 739 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 RTCBQ9Y3I0 505 aaKnown RBP17.03■□□□□ 0.32
PTBP1-203ENST00000356948 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 SNED1Q8TER0 1413 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 PSMA7O14818 248 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 RAD21O60216 631 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 DNA2P51530 1060 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 CEP112Q8N8E3 955 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 ANKRD20A12PQ8NF67 263 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 NGLY1Q96IV0 654 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 NOC4LQ9BVI4 516 aaKnown RBP17.03■□□□□ 0.32
PTBP1-203ENST00000356948 IDEP14735 1019 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 C2orf54Q08AI8 447 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 CASP8Q14790 479 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 P2RX5Q93086 422 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 RABEP2Q9H5N1 569 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 BLOC1S4Q9NUP1 217 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 SALL4Q9UJQ4 1053 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 CAPN6Q9Y6Q1 641 aa17.03■□□□□ 0.32
PTBP1-203ENST00000356948 FAM196BA6NMK8 535 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.32
PTBP1-203ENST00000356948 KIAA1328Q86T90 577 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 TXLNBQ8N3L3 684 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 ZMYND12Q9H0C1 365 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 EXOC1Q9NV70 894 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 COL22A1Q8NFW1 1626 aaPredicted RBP17.02■□□□□ 0.32
PTBP1-203ENST00000356948 SRGNP10124 158 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 GRB10Q13322 594 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 CT47A1Q5JQC4 288 aaPredicted RBP17.02■□□□□ 0.32
PTBP1-203ENST00000356948 TRAPPC11Q7Z392 1133 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 MSANTD4Q8NCY6 345 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 CCDC51Q96ER9 411 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 PNMA5Q96PV4 448 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 CD209Q9NNX6 404 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 RAB21Q9UL25 225 aa17.02■□□□□ 0.32
PTBP1-203ENST00000356948 RREB1Q92766 1687 aa17.02■□□□□ 0.31
PTBP1-203ENST00000356948 MYO1CO00159 1063 aa17.02■□□□□ 0.31
PTBP1-203ENST00000356948 NCK2O43639 380 aa17.02■□□□□ 0.31
PTBP1-203ENST00000356948 SPAG1Q07617 926 aa17.02■□□□□ 0.31
PTBP1-203ENST00000356948 ENOX2Q16206 610 aaKnown RBP17.02■□□□□ 0.31
PTBP1-203ENST00000356948 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.31
PTBP1-203ENST00000356948 BCAS3Q9H6U6 928 aa17.02■□□□□ 0.31
PTBP1-203ENST00000356948 LRRC4BQ9NT99 713 aa17.02■□□□□ 0.31
PTBP1-203ENST00000356948 PCDHAC2Q9Y5I4 1007 aa17.02■□□□□ 0.31
PTBP1-203ENST00000356948 COL5A3P25940 1745 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-203ENST00000356948 MFSD14BQ5SR56 506 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 TCP11L1Q9NUJ3 509 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 MAGEC2Q9UBF1 373 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-203ENST00000356948 POLLQ9UGP5 575 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 LAMB1P07942 1786 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 NPHP3-ACAD11A0A0J9YXS1 232 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 PPP1R11O60927 126 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-203ENST00000356948 RFC4P35249 363 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 PPARDQ03181 441 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 NONOQ15233 471 aaKnown RBP eCLIP17.01■□□□□ 0.312e-7■■■□□ 18.3
PTBP1-203ENST00000356948 TMED8Q6PL24 325 aaPredicted RBP17.01■□□□□ 0.31
PTBP1-203ENST00000356948 COG1Q8WTW3 980 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 DEF6Q9H4E7 631 aa17.01■□□□□ 0.31
PTBP1-203ENST00000356948 RHBDL3P58872 404 aa17■□□□□ 0.31
PTBP1-203ENST00000356948 SNAP25P60880 206 aa17■□□□□ 0.31
PTBP1-203ENST00000356948 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
PTBP1-203ENST00000356948 ARHGAP20Q9P2F6 1191 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms