RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 GRIN1Q05586 938 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 AP3B2Q13367 1082 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 LETM2Q2VYF4 491 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 ZSCAN23Q3MJ62 389 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 TEX2Q8IWB9 1127 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 JMYQ8N9B5 988 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 CLIC6Q96NY7 704 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 ASCC2Q9H1I8 757 aaPredicted RBP20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 GOLPH3LQ9H4A5 285 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 RIPK3Q9Y572 518 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 A0A1W2PQ27 194 aa20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 A0A1W2PQ64 194 aa20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 A0A1W2PQD8 194 aa20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 ATP2A1O14983 1001 aa20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 BMP15O95972 392 aa20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 PTPREP23469 700 aa20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 MKRN3Q13064 507 aaKnown RBP20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 SPRYD7Q5W111 196 aa20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 KRI1Q8N9T8 703 aaKnown RBP20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 HOMER2Q9NSB8 354 aa20.66■□□□□ 0.9
SMARCD3-202ENST00000356800 GCOM1H8Y6P7 765 aaPredicted RBP20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 POLR2MP0CAP2 368 aa20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 HUNKP57058 714 aa20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 CCDC183Q5T5S1 534 aa20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 CCAR1Q8IX12 1150 aaKnown RBP20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 CRYGNQ8WXF5 182 aa20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 TMEM60Q9H2L4 133 aa20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 PNMA2Q9UL42 364 aa20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 SRPRBQ9Y5M8 271 aaKnown RBP20.65■□□□□ 0.9
SMARCD3-202ENST00000356800 CCNT1O60563 726 aaKnown RBP20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 PEX10O60683 326 aa20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 CUTAO60888 179 aa20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 FOSP01100 380 aaPredicted RBP20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 HSD17B4P51659 736 aa20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 ZNF445P59923 1031 aa20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 IRX3P78415 501 aaPredicted RBP20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 GHRHRQ02643 423 aa20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 MCTP2Q6DN12 878 aa20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 SNRNP48Q6IEG0 339 aaKnown RBP20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 LBX2Q6XYB7 198 aa20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 TRERF1Q96PN7 1200 aa20.64■□□□□ 0.9
SMARCD3-202ENST00000356800 TDP2O95551 362 aa20.64■□□□□ 0.89
SMARCD3-202ENST00000356800 SHC4Q6S5L8 630 aa20.64■□□□□ 0.89
SMARCD3-202ENST00000356800 FCHSD1Q86WN1 690 aa20.64■□□□□ 0.89
SMARCD3-202ENST00000356800 FSIP1Q8NA03 581 aa20.64■□□□□ 0.89
SMARCD3-202ENST00000356800 TEX13BQ9BXU2 312 aa20.64■□□□□ 0.89
SMARCD3-202ENST00000356800 BTBD7Q9P203 1132 aa20.64■□□□□ 0.89
SMARCD3-202ENST00000356800 SPDYE3A6NKU9 549 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 ZBTB48P10074 688 aaPredicted RBP20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 CETPP11597 493 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 CMA1P23946 247 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 SREBF1P36956 1147 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 GTF2A2P52657 109 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 HERVK_113P62684 666 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 IL17AQ16552 155 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 BRI3BPQ8WY22 251 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 RNF146Q9NTX7 359 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 COL20A1Q9P218 1284 aa20.63■□□□□ 0.89
SMARCD3-202ENST00000356800 NR1I2O75469 434 aa20.62■□□□□ 0.89
SMARCD3-202ENST00000356800 STAT3P40763 770 aa20.62■□□□□ 0.89
SMARCD3-202ENST00000356800 ARHGAP4P98171 946 aa20.62■□□□□ 0.89
SMARCD3-202ENST00000356800 SAPCD2Q86UD0 394 aa20.62■□□□□ 0.89
SMARCD3-202ENST00000356800 MB21D1Q8N884 522 aa20.62■□□□□ 0.89
SMARCD3-202ENST00000356800 ENGASEQ8NFI3 743 aa20.62■□□□□ 0.89
SMARCD3-202ENST00000356800 MRPS27Q92552 414 aaKnown RBP20.62■□□□□ 0.89
SMARCD3-202ENST00000356800 CCL15-CCL14A0A0B4J2E2 113 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 A0A1B0GVL5 298 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 SLC37A4O43826 429 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 NEMFO60524 1076 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 CNMDO75829 334 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 LETM1O95202 739 aaPredicted RBP20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 USP11P51784 963 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 PABPC4Q13310 644 aaKnown RBP eCLIP20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 ORC2Q13416 577 aaPredicted RBP20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 PLS1Q14651 629 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 CCL15Q16663 113 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 RESP18Q5W5W9 173 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 PPP4R3AQ6IN85 833 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 MCF2L2Q86YR7 1114 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 SMC1BQ8NDV3 1235 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 FERMT2Q96AC1 680 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 CSRNP2Q9H175 543 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 DDX19AQ9NUU7 478 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 DACT1Q9NYF0 836 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 BTBD19C9JJ37 291 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 OSBPP22059 807 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 NDUFA8P51970 172 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 SNW1Q13573 536 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 SPECC1Q5M775 1068 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 ARL6IP4Q66PJ3 421 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 RASAL3Q86YV0 1011 aa20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
SMARCD3-202ENST00000356800 LCTP09848 1927 aa20.6■□□□□ 0.89
SMARCD3-202ENST00000356800 TKFCQ3LXA3 575 aa20.6■□□□□ 0.89
SMARCD3-202ENST00000356800 SLC30A10Q6XR72 485 aa20.6■□□□□ 0.89
SMARCD3-202ENST00000356800 SYTL5Q8TDW5 730 aaPredicted RBP20.6■□□□□ 0.89
SMARCD3-202ENST00000356800 MBOAT7Q96N66 472 aa20.6■□□□□ 0.89
SMARCD3-202ENST00000356800 TXNRD2Q9NNW7 524 aa20.6■□□□□ 0.89
SMARCD3-202ENST00000356800 CYP3A7-CYP3A51PA0A087WV96 503 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms