RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 UNC5CLQ8IV45 518 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 PRPF31Q8WWY3 499 aaKnown RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 CCDC17Q96LX7 622 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 LRRC41Q15345 812 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 DIXDC1Q155Q3 683 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 ZNF589Q86UQ0 364 aaPredicted RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 CACYBPQ9HB71 228 aaKnown RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 ZNF277Q9NRM2 450 aaPredicted RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 PNMA2Q9UL42 364 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 NUB1Q9Y5A7 615 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 CSPG5O95196 566 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 PCP11498 1178 aaKnown RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 POLR2BP30876 1174 aaKnown RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 CASQ2O14958 399 aaPredicted RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 COPB1P53618 953 aaKnown RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 PLCB4Q15147 1175 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 GPATCH4Q5T3I0 446 aaKnown RBP14.45□□□□□ -0.1
SCN8A-202ENST00000355133 LMNTD2Q8IXW0 634 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 PPP4R1Q8TF05 950 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 PIGSQ96S52 555 aa14.45□□□□□ -0.1
SCN8A-202ENST00000355133 RNF40O75150 1001 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 RAD17O75943 681 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 FMNL1O95466 1100 aaPredicted RBP14.44□□□□□ -0.1
SCN8A-202ENST00000355133 TTBK2Q6IQ55 1244 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 PI16Q6UXB8 463 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 RASEFQ8IZ41 740 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 LARP4BQ92615 738 aaKnown RBP14.44□□□□□ -0.1
SCN8A-202ENST00000355133 MAP4K1Q92918 833 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 RPGRIP1Q96KN7 1286 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 ZNF148Q9UQR1 794 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 FAM135BQ49AJ0 1406 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 H7C0C1 242 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 THAP12O43422 761 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 RNF8O76064 485 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 TROVE2P10155 538 aaKnown RBP eCLIP14.44□□□□□ -0.1
SCN8A-202ENST00000355133 ATP5OP48047 213 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 RASSF7Q02833 373 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 POTEDQ86YR6 584 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 FBXO18Q8NFZ0 1043 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 CFAP65Q6ZU64 1925 aaKnown RBP14.44□□□□□ -0.1
SCN8A-202ENST00000355133 CCDC170Q8IYT3 715 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 MAD1L1Q9Y6D9 718 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 AOC3Q16853 763 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 LCORLQ8N3X6 602 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 MIS12Q9H081 205 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 STK38LQ9Y2H1 464 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 A6NJR5 290 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 INO80B-WBP1J3KQ70 363 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 MEIS1O00470 390 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 ATF2P15336 505 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 OSBPP22059 807 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 MFAP3P55082 362 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 PTK2Q05397 1052 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 APOA5Q6Q788 366 aa14.44□□□□□ -0.1
SCN8A-202ENST00000355133 INO80BQ9C086 356 aaPredicted RBP14.44□□□□□ -0.1
SCN8A-202ENST00000355133 SOS2Q07890 1332 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 YEATS2Q9ULM3 1422 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 TTC36A6NLP5 189 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 RBM6P78332 1123 aaKnown RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 CCNA1P78396 465 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 MESDQ14696 234 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 SMYD4Q8IYR2 804 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 ATP6V0A1Q93050 837 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 COA7Q96BR5 231 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 PCIF1Q9H4Z3 704 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 CYP21A2P08686 494 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 NR2F2P24468 414 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 SKA2Q8WVK7 121 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 PTPN22Q9Y2R2 807 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 RGS12O14924 1447 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 ZFYVE16Q7Z3T8 1539 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 EHHADHQ08426 723 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 SH2D4BQ5SQS7 431 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 RFX6Q8HWS3 928 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 ABI1Q8IZP0 508 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 NT5C1BQ96P26 610 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 VCXQ9H320 206 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 GSTA1P08263 222 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 GSTA2P09210 222 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 USP14P54578 494 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 MKRN3Q13064 507 aaKnown RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 TSTA3Q13630 321 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 EEPD1Q7L9B9 569 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 TBCKQ8TEA7 893 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 ZNF526Q8TF50 670 aaPredicted RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 TUBGCP2Q9BSJ2 902 aa14.43□□□□□ -0.1
SCN8A-202ENST00000355133 KDM5AP29375 1690 aaKnown RBP14.43□□□□□ -0.1
SCN8A-202ENST00000355133 SEPT6Q14141 434 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 PTPN21Q16825 1174 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 RINT1Q6NUQ1 792 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 MIGA2Q7L4E1 593 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 GPT2Q8TD30 523 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 SLC7A3Q8WY07 619 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 DYNLL2Q96FJ2 89 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 PLEKHF1Q96S99 279 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 KMT5AQ9NQR1 393 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 CLIC2O15247 247 aa14.42□□□□□ -0.1
SCN8A-202ENST00000355133 ADD2P35612 726 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms