RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 DACT2Q5SW24 774 aa15.58■□□□□ 0.09
TRIM4-201ENST00000349062 POTEAQ6S8J7 498 aa15.58■□□□□ 0.09
TRIM4-201ENST00000349062 TMOD2Q9NZR1 351 aa15.58■□□□□ 0.09
TRIM4-201ENST00000349062 MAGEC2Q9UBF1 373 aaPredicted RBP15.58■□□□□ 0.09
TRIM4-201ENST00000349062 PI4KBQ9UBF8 816 aa15.58■□□□□ 0.09
TRIM4-201ENST00000349062 ZNF76P36508 570 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 MTIF2P46199 727 aaKnown RBP15.58■□□□□ 0.08
TRIM4-201ENST00000349062 CYP4A11Q02928 519 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 TERF2Q15554 542 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 PRR16Q569H4 304 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 NELFCDQ8IXH7 590 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 OGFOD1Q8N543 542 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 KIFC2Q96AC6 838 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 TANGO6Q9C0B7 1094 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.58■□□□□ 0.08
TRIM4-201ENST00000349062 DDX25Q9UHL0 483 aaKnown RBP15.58■□□□□ 0.08
TRIM4-201ENST00000349062 TFR2Q9UP52 801 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 SHTN1A0MZ66 631 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 PLSCR1O15162 318 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 CFBP00751 764 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 CDC37Q16543 378 aaPredicted RBP15.58■□□□□ 0.08
TRIM4-201ENST00000349062 TMEM266Q2M3C6 531 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 ASPRV1Q53RT3 343 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 CSGALNACT2Q8N6G5 542 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 TRIML1Q8N9V2 468 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 ANKS1AQ92625 1134 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 EPC1Q9H2F5 836 aa15.58■□□□□ 0.08
TRIM4-201ENST00000349062 AKR1B15C9JRZ8 316 aaPredicted RBP15.57■□□□□ 0.08
TRIM4-201ENST00000349062 SLU7O95391 586 aaKnown RBP15.57■□□□□ 0.08
TRIM4-201ENST00000349062 GABPAQ06546 454 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 STIM1Q13586 685 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 TMC4Q7Z404 712 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 GLIS3Q8NEA6 775 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 CUL5Q93034 780 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 SBF2Q86WG5 1849 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 NPHP3-ACAD11A0A0J9YXS1 232 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 YDJCA8MPS7 323 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 TPM1P09493 284 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 ZNF18P17022 549 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 FXR1P51114 621 aaKnown RBP eCLIP15.57■□□□□ 0.08
TRIM4-201ENST00000349062 ARL6IP4Q66PJ3 421 aaKnown RBP15.57■□□□□ 0.08
TRIM4-201ENST00000349062 SH3RF1Q7Z6J0 888 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 ACER1Q8TDN7 264 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 CNKSR1Q969H4 720 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 PPP2R2CQ9Y2T4 447 aa15.57■□□□□ 0.08
TRIM4-201ENST00000349062 PNMA6FA0A0J9YX94 578 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 CCDC66A2RUB6 948 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 B4DLN1 442 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 ERCC5P28715 1186 aaPredicted RBP15.56■□□□□ 0.08
TRIM4-201ENST00000349062 KLK7P49862 253 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 TC2NQ8N9U0 490 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 ACRBPQ8NEB7 543 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 FLAD1Q8NFF5 587 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 CCDC47Q96A33 483 aaKnown RBP15.56■□□□□ 0.08
TRIM4-201ENST00000349062 TMEM39BQ9GZU3 492 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 KLRG2A4D1S0 409 aaPredicted RBP15.56■□□□□ 0.08
TRIM4-201ENST00000349062 PSMA7O14818 248 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 NKRFO15226 690 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRIM4-201ENST00000349062 MRPL12P52815 198 aaKnown RBP15.56■□□□□ 0.08
TRIM4-201ENST00000349062 DLGAP5Q15398 846 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 NT5DC1Q5TFE4 455 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 ZNF658Q5TYW1 1059 aaPredicted RBP15.56■□□□□ 0.08
TRIM4-201ENST00000349062 KRT79Q5XKE5 535 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 CERS3Q8IU89 383 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 PSMD14O00487 310 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 GABPB1Q06547 395 aaPredicted RBP15.56■□□□□ 0.08
TRIM4-201ENST00000349062 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 HHIPL2Q6UWX4 724 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 KCNK18Q7Z418 384 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 NOC3LQ8WTT2 800 aaKnown RBP15.56■□□□□ 0.08
TRIM4-201ENST00000349062 HOMER2Q9NSB8 354 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 RMND1Q9NWS8 449 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 FZD1Q9UP38 647 aa15.56■□□□□ 0.08
TRIM4-201ENST00000349062 ROBO3Q96MS0 1386 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 RNF225M0QZC1 329 aaPredicted RBP15.55■□□□□ 0.08
TRIM4-201ENST00000349062 ZBTB5O15062 677 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 DPEP1P16444 411 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 COPB1P53618 953 aaKnown RBP15.55■□□□□ 0.08
TRIM4-201ENST00000349062 DGKZQ13574 1117 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 RRP1BQ14684 758 aaKnown RBP15.55■□□□□ 0.08
TRIM4-201ENST00000349062 ARHGAP29Q52LW3 1261 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 PRAMEF18Q5VWM3 479 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 SV2BQ7L1I2 683 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 SLF1Q9BQI6 1058 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 PCDHA12Q9UN75 941 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 E9PMD0 336 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 KRT9P35527 623 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 NR1I3Q14994 352 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 NCAPH2Q6IBW4 605 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 CPXCR1Q8N123 301 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 TBC1D5Q92609 795 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 RIOX1Q9H6W3 641 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 KIAA1024Q9UPX6 916 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 BRWD3Q6RI45 1802 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 UBR3Q6ZT12 1888 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 M0R2N6 131 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 NDUFB10O96000 172 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 MNS1Q8NEH6 495 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 CYP2W1Q8TAV3 490 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 SWAP70Q9UH65 585 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms