RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 RSPH14Q9UHP6 348 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 RPN1P04843 607 aaKnown RBP16.94■□□□□ 0.3
PTPRO-202ENST00000348962 CYP21A2P08686 494 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 MKRN3Q13064 507 aaKnown RBP16.94■□□□□ 0.3
PTPRO-202ENST00000348962 FYB2Q5VWT5 728 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 BSPRYQ5W0U4 402 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 KLHL7Q8IXQ5 586 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 IFNB1P01574 187 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 TPD52P55327 224 aaPredicted RBP16.94■□□□□ 0.3
PTPRO-202ENST00000348962 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
PTPRO-202ENST00000348962 ANKRD36BP1Q96IX9 119 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 ZBTB7AO95365 584 aa16.94■□□□□ 0.3
PTPRO-202ENST00000348962 H7C1W4 665 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 PFDN6O15212 129 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 RUFY4Q6ZNE9 571 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 INTS8Q75QN2 995 aaKnown RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 CACTINQ8WUQ7 758 aaKnown RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 SYMPKQ92797 1274 aaKnown RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 ATP2A3Q93084 1043 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 NT5C1BQ96P26 610 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 OSBPL3Q9H4L5 887 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 KMT5AQ9NQR1 393 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 FBXO40Q9UH90 709 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 PSDA5PKW4 1024 aaPredicted RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 PRKAB2O43741 272 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 RASGRF1Q13972 1273 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 PPP2R5EQ16537 467 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 GADD45BO75293 160 aaPredicted RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 PIK3CAP42336 1068 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 NSFP46459 744 aaKnown RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 RPAP1Q9BWH6 1393 aaPredicted RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 VIMP08670 466 aaKnown RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 EEPD1Q7L9B9 569 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 TBCKQ8TEA7 893 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 ZNF341Q9BYN7 854 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 RBSNQ9H1K0 784 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 DISC1Q9NRI5 854 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
PTPRO-202ENST00000348962 NOC2LQ9Y3T9 749 aaKnown RBP16.93■□□□□ 0.3
PTPRO-202ENST00000348962 SPDYE16A6NNV3 312 aaPredicted RBP16.92■□□□□ 0.3
PTPRO-202ENST00000348962 PAK2Q13177 524 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 SPDYE2Q495Y8 402 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 VPS18Q9P253 973 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 SPATA31E1Q6ZUB1 1445 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 BBS5Q8N3I7 341 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 RAB17Q9H0T7 212 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 RIC8AQ9NPQ8 531 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 CDK8P49336 464 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 PPP2R5CQ13362 524 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 MUM1L1Q5H9M0 696 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 ELMSAN1Q6PJG2 1045 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 MAP7D3Q8IWC1 876 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 ACCSQ96QU6 501 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 PSMB7Q99436 277 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 H2AFZP0C0S5 128 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 SCRN1Q12765 414 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 LONRF2Q1L5Z9 754 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 H2AFVQ71UI9 128 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 OVOS2A0A0J9YW53 1432 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 OVOS2Q6IE36 1432 aa16.92■□□□□ 0.3
PTPRO-202ENST00000348962 M0R2C6 588 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 PSAPP07602 524 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 PLCB4Q15147 1175 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 EXOC3L4Q17RC7 722 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 LONRF3Q496Y0 759 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 USP17L2Q6R6M4 530 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 IFT122Q9HBG6 1241 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 HOXC10Q9NYD6 342 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 PCDHA7Q9UN72 937 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 MFAP3P55082 362 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 PDXDC2PQ6P474 469 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 TRIM58Q8NG06 486 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 DYNLL2Q96FJ2 89 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 KRT15P19012 456 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 CRKP46108 304 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.91■□□□□ 0.3
PTPRO-202ENST00000348962 NLRP7Q8WX94 980 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 FAM81BQ96LP2 452 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 TMEM206Q9H813 350 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 HECW2Q9P2P5 1572 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 ITKQ08881 620 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 TXNRD1Q16881 649 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
PTPRO-202ENST00000348962 DGKHQ86XP1 1220 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 GSDMAQ96QA5 445 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 XPO4Q9C0E2 1151 aaKnown RBP16.91■□□□□ 0.3
PTPRO-202ENST00000348962 RNF181Q9P0P0 153 aa16.91■□□□□ 0.3
PTPRO-202ENST00000348962 CARMIL3Q8ND23 1372 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 ZNF853P0CG23 659 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 POLR2FP61218 127 aaKnown RBP16.9■□□□□ 0.3
PTPRO-202ENST00000348962 CDC37Q16543 378 aaPredicted RBP16.9■□□□□ 0.3
PTPRO-202ENST00000348962 HHATQ5VTY9 493 aa16.9■□□□□ 0.3
PTPRO-202ENST00000348962 SPATA1Q5VX52 437 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms