RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 USP17L24Q0WX57 530 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 PDIA5Q14554 519 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 ZYXQ15942 572 aaKnown RBP28.51■■■□□ 2.15
TRADD-201ENST00000345057 NBPF12Q5TAG4 269 aaPredicted RBP28.51■■■□□ 2.15
TRADD-201ENST00000345057 USP17L6PQ6QN14 398 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 IGSF22Q8N9C0 903 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 SCAF8Q9UPN6 1271 aaKnown RBP28.51■■■□□ 2.15
TRADD-201ENST00000345057 GTPBP6O43824 516 aaPredicted RBP28.51■■■□□ 2.15
TRADD-201ENST00000345057 TDP2O95551 362 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 DPYDQ12882 1025 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 CABP7Q86V35 215 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 PLA2G4DQ86XP0 818 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 GRAMD1CQ8IYS0 662 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 KIFC2Q96AC6 838 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 AS3MTQ9HBK9 375 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 ZNF112Q9UJU3 913 aa28.51■■■□□ 2.15
TRADD-201ENST00000345057 PITPNM2Q9BZ72 1349 aa28.5■■■□□ 2.15
TRADD-201ENST00000345057 SBF1O95248 1867 aa28.5■■■□□ 2.15
TRADD-201ENST00000345057 ESPNB1AK53 854 aa28.5■■■□□ 2.15
TRADD-201ENST00000345057 LMOD1P29536 600 aaPredicted RBP28.5■■■□□ 2.15
TRADD-201ENST00000345057 MYL5Q02045 173 aa28.5■■■□□ 2.15
TRADD-201ENST00000345057 SEMA3FQ13275 785 aa28.5■■■□□ 2.15
TRADD-201ENST00000345057 KARSQ15046 597 aaKnown RBP28.5■■■□□ 2.15
TRADD-201ENST00000345057 ISM2Q6H9L7 571 aa28.5■■■□□ 2.15
TRADD-201ENST00000345057 ZSCAN30Q86W11 494 aa28.5■■■□□ 2.15
TRADD-201ENST00000345057 TRPM4Q8TD43 1214 aa28.5■■■□□ 2.15
TRADD-201ENST00000345057 CDC25BP30305 580 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 TXKP42681 527 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 ZNF75DP51815 510 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 SNAP25P60880 206 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 CALML4Q96GE6 196 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 RMND1Q9NWS8 449 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.49■■■□□ 2.15
TRADD-201ENST00000345057 MRPL11Q9Y3B7 192 aaKnown RBP28.49■■■□□ 2.15
TRADD-201ENST00000345057 CYP3A7-CYP3A51PA0A087WV96 503 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 CYP3A7P24462 503 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 TECP42680 631 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 SCYL3Q8IZE3 742 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 GLIS2Q9BZE0 524 aaPredicted RBP28.49■■■□□ 2.15
TRADD-201ENST00000345057 GGA3Q9NZ52 723 aa28.49■■■□□ 2.15
TRADD-201ENST00000345057 SLC37A4O43826 429 aa28.48■■■□□ 2.15
TRADD-201ENST00000345057 MARCH6O60337 910 aa28.48■■■□□ 2.15
TRADD-201ENST00000345057 SUPT20HL1Q3ZLR7 823 aa28.48■■■□□ 2.15
TRADD-201ENST00000345057 MRFAP1L1Q96HT8 127 aa28.48■■■□□ 2.15
TRADD-201ENST00000345057 PNMA2Q9UL42 364 aa28.48■■■□□ 2.15
TRADD-201ENST00000345057 ABCB11O95342 1321 aa28.48■■■□□ 2.15
TRADD-201ENST00000345057 EDIL3O43854 480 aa28.47■■■□□ 2.15
TRADD-201ENST00000345057 PICK1Q9NRD5 415 aa28.47■■■□□ 2.15
TRADD-201ENST00000345057 LRWD1Q9UFC0 647 aa28.47■■■□□ 2.15
TRADD-201ENST00000345057 DOCK1Q14185 1865 aa28.47■■■□□ 2.15
TRADD-201ENST00000345057 CDC25AP30304 524 aa28.46■■■□□ 2.15
TRADD-201ENST00000345057 PRPF38AQ8NAV1 312 aaKnown RBP28.46■■■□□ 2.15
TRADD-201ENST00000345057 WDR18Q9BV38 432 aa28.46■■■□□ 2.15
TRADD-201ENST00000345057 MSNP26038 577 aaKnown RBP28.46■■■□□ 2.15
TRADD-201ENST00000345057 SREBF1P36956 1147 aa28.46■■■□□ 2.15
TRADD-201ENST00000345057 EPS15P42566 896 aa28.46■■■□□ 2.15
TRADD-201ENST00000345057 MBOAT7Q96N66 472 aa28.46■■■□□ 2.15
TRADD-201ENST00000345057 SLF1Q9BQI6 1058 aa28.46■■■□□ 2.15
TRADD-201ENST00000345057 EHMT1Q9H9B1 1298 aa28.46■■■□□ 2.15
TRADD-201ENST00000345057 ADARB2Q9NS39 739 aaKnown RBP28.46■■■□□ 2.15
TRADD-201ENST00000345057 RNF181Q9P0P0 153 aa28.46■■■□□ 2.15
TRADD-201ENST00000345057 PP2D1A8MPX8 630 aa28.45■■■□□ 2.15
TRADD-201ENST00000345057 ERCC5P28715 1186 aaPredicted RBP28.45■■■□□ 2.15
TRADD-201ENST00000345057 ARHGAP4P98171 946 aa28.45■■■□□ 2.15
TRADD-201ENST00000345057 MYH7BA7E2Y1 1941 aa28.45■■■□□ 2.15
TRADD-201ENST00000345057 SLC26A4O43511 780 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 BMP6P22004 513 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 NCAPHQ15003 741 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 CCDC174Q6PII3 467 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 SLFN12Q8IYM2 578 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 CRYGNQ8WXF5 182 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 WRNIP1Q96S55 665 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 GCOM1H8Y6P7 765 aaPredicted RBP28.44■■■□□ 2.14
TRADD-201ENST00000345057 TBX3O15119 743 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 POLR2MP0CAP2 368 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 FDX1P10109 184 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 INPP5BP32019 993 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 AMPD3Q01432 767 aa28.44■■■□□ 2.14
TRADD-201ENST00000345057 CCDC84Q86UT8 332 aaPredicted RBP28.44■■■□□ 2.14
TRADD-201ENST00000345057 TTC12Q9H892 705 aaPredicted RBP28.44■■■□□ 2.14
TRADD-201ENST00000345057 NAALADL2Q58DX5 795 aa28.43■■■□□ 2.14
TRADD-201ENST00000345057 KRT79Q5XKE5 535 aa28.43■■■□□ 2.14
TRADD-201ENST00000345057 DRC7Q8IY82 874 aa28.43■■■□□ 2.14
TRADD-201ENST00000345057 CDK5RAP3Q96JB5 506 aa28.43■■■□□ 2.14
TRADD-201ENST00000345057 KBTBD4Q9NVX7 518 aa28.43■■■□□ 2.14
TRADD-201ENST00000345057 STK17AQ9UEE5 414 aa28.43■■■□□ 2.14
TRADD-201ENST00000345057 OPLAHO14841 1288 aa28.42■■■□□ 2.14
TRADD-201ENST00000345057 Q4G0T1 1027 aa28.42■■■□□ 2.14
TRADD-201ENST00000345057 ENOX1Q8TC92 643 aaKnown RBP28.42■■■□□ 2.14
TRADD-201ENST00000345057 GTPBP4Q9BZE4 634 aaKnown RBP28.42■■■□□ 2.14
TRADD-201ENST00000345057 PCDHA12Q9UN75 941 aa28.42■■■□□ 2.14
TRADD-201ENST00000345057 ZKSCAN5Q9Y2L8 839 aa28.42■■■□□ 2.14
TRADD-201ENST00000345057 UTRNP46939 3433 aa28.42■■■□□ 2.14
TRADD-201ENST00000345057 ICAM1P05362 532 aa28.42■■■□□ 2.14
TRADD-201ENST00000345057 PLCG1P19174 1290 aa28.42■■■□□ 2.14
TRADD-201ENST00000345057 CYP3A4P08684 503 aa28.41■■■□□ 2.14
TRADD-201ENST00000345057 CIITAP33076 1130 aa28.41■■■□□ 2.14
TRADD-201ENST00000345057 HIRAP54198 1017 aaPredicted RBP28.41■■■□□ 2.14
TRADD-201ENST00000345057 ZNF280CQ8ND82 737 aa28.41■■■□□ 2.14
TRADD-201ENST00000345057 CCDC47Q96A33 483 aaKnown RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms