RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 ABCC4O15439 1325 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 TMEM191BP0C7N4 346 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 EEF1GP26641 437 aaKnown RBP16.41■□□□□ 0.22
CUL3-202ENST00000344951 ZBTB33Q86T24 672 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 SLC5A4Q9NY91 659 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 HESX1Q9UBX0 185 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 KIAA0825Q8IV33 1275 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 PDE6CP51160 858 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 ZSWIM6Q9HCJ5 1215 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 A2MP01023 1474 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 RGS12O14924 1447 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
CUL3-202ENST00000344951 RNF40O75150 1001 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 ACTN1P12814 892 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 GPKOWQ92917 476 aaPredicted RBP eCLIP16.41■□□□□ 0.225e-7■■□□□ 13
CUL3-202ENST00000344951 GPC4O75487 556 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 ARHGAP4P98171 946 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 RPGRIP1Q96KN7 1286 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 PANK4Q9NVE7 773 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 INTUQ9ULD6 942 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 ZNF148Q9UQR1 794 aa16.41■□□□□ 0.22
CUL3-202ENST00000344951 NUP153P49790 1475 aaKnown RBP16.41■□□□□ 0.22
CUL3-202ENST00000344951 ATP10BO94823 1461 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 TTC4O95801 387 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 YWHAEP62258 255 aaKnown RBP16.4■□□□□ 0.22
CUL3-202ENST00000344951 BFSP1Q12934 665 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 PPP2R5EQ16537 467 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 C7orf31Q8N865 590 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 TRIM58Q8NG06 486 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 OR8K1Q8NGG5 319 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 IPO11Q9UI26 975 aaKnown RBP16.4■□□□□ 0.22
CUL3-202ENST00000344951 PCDHB4Q9Y5E5 795 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 CLRN2A0PK11 232 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 CROCCP2Q86T23 111 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 P3H4Q92791 437 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 CFAP36Q96G28 342 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 TYW5A2RUC4 315 aaKnown RBP16.4■□□□□ 0.22
CUL3-202ENST00000344951 PFDN6O15212 129 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 CYP4A11Q02928 519 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 RSBN1LQ6PCB5 846 aaPredicted RBP16.4■□□□□ 0.22
CUL3-202ENST00000344951 SLITRK6Q9H5Y7 841 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 SOX5P35711 763 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 SYNDIG1Q9H7V2 258 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 HYOU1Q9Y4L1 999 aa16.4■□□□□ 0.22
CUL3-202ENST00000344951 RPSAP08865 295 aaKnown RBP16.39■□□□□ 0.21
CUL3-202ENST00000344951 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 UHRF1BP1Q6BDS2 1440 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 CLTAP09496 248 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 CCT5P48643 541 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 PDE1BQ01064 536 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 SKIV2LQ15477 1246 aaKnown RBP16.39■□□□□ 0.21
CUL3-202ENST00000344951 LAMC3Q9Y6N6 1575 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 POLR2FP61218 127 aaKnown RBP16.39■□□□□ 0.21
CUL3-202ENST00000344951 ASPHQ12797 758 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 KRT27Q7Z3Y8 459 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 IP6K1Q92551 441 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 HEXIM1O94992 359 aaKnown RBP16.39■□□□□ 0.21
CUL3-202ENST00000344951 EEF1B2P24534 225 aaKnown RBP16.39■□□□□ 0.21
CUL3-202ENST00000344951 NSUN2Q08J23 767 aaKnown RBP eCLIP16.39■□□□□ 0.21
CUL3-202ENST00000344951 RINT1Q6NUQ1 792 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 SPATA5Q8NB90 893 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.21
CUL3-202ENST00000344951 FAM149B1Q96BN6 582 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 PFKFB2O60825 505 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 GNPTABQ3T906 1256 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 KRT25Q7Z3Z0 450 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 RAB17Q9H0T7 212 aa16.39■□□□□ 0.21
CUL3-202ENST00000344951 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 ATF2P15336 505 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 TRPM2O94759 1503 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 GARSP41250 739 aaKnown RBP16.38■□□□□ 0.21
CUL3-202ENST00000344951 GCKRQ14397 625 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 DPY19L2Q6NUT2 758 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 RAB44Q7Z6P3 723 aaPredicted RBP16.38■□□□□ 0.21
CUL3-202ENST00000344951 ABTB1Q969K4 478 aaPredicted RBP16.38■□□□□ 0.21
CUL3-202ENST00000344951 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
CUL3-202ENST00000344951 GCKP35557 465 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 IFNAR2P48551 515 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 ARMCX5Q6P1M9 558 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 PI4K2BQ8TCG2 481 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 KLHL14Q9P2G3 628 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 A0A087WWV3 80 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 CDC25BP30305 580 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 PIP4K2CQ8TBX8 421 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 ZNF274Q96GC6 653 aaPredicted RBP16.38■□□□□ 0.21
CUL3-202ENST00000344951 SLC39A2Q9NP94 309 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 TRAPPC8Q9Y2L5 1435 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 WDR91A4D1P6 747 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 GOLGA8SH3BPF8 625 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 STAT1P42224 750 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 CCDC84Q86UT8 332 aaPredicted RBP16.38■□□□□ 0.21
CUL3-202ENST00000344951 UHRF1BP1LA0JNW5 1464 aa16.38■□□□□ 0.21
CUL3-202ENST00000344951 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms