RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 TMEM259Q4ZIN3 620 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 PLEKHM2Q8IWE5 1019 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 ZMYND12Q9H0C1 365 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 GID8Q9NWU2 228 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 ZNF148Q9UQR1 794 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 SNAPC4Q5SXM2 1469 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 HNRNPRO43390 633 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 NBNO60934 754 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 SNRPA1P09661 255 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 YWHAGP61981 247 aaKnown RBP eCLIP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 TCEANC2Q96MN5 208 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 THUMPD2Q9BTF0 503 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 KLC2Q9H0B6 622 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 PGRMC1O00264 195 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 HERC4Q5GLZ8 1057 aaPredicted RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 CEP78Q5JTW2 689 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 ACBD5Q5T8D3 534 aaPredicted RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 SLC17A8Q8NDX2 589 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 UTP6Q9NYH9 597 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 MPP6Q9NZW5 540 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 BUB1O43683 1085 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 PATL1Q86TB9 770 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 CYTH2Q99418 400 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 METTL14Q9HCE5 456 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 DNAJC17Q9NVM6 304 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 ITGB1BP2Q9UKP3 347 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 DIS3Q9Y2L1 958 aaKnown RBP9.04□□□□□ -0.96
MCPH1-201ENST00000344683 L3MBTL1Q9Y468 752 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 ARAP1Q96P48 1450 aa9.04□□□□□ -0.96
MCPH1-201ENST00000344683 KDM5AP29375 1690 aaKnown RBP9.03□□□□□ -0.96
MCPH1-201ENST00000344683 SSH2Q76I76 1423 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 A6NJR5 290 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PTCD1O75127 700 aaKnown RBP9.03□□□□□ -0.96
MCPH1-201ENST00000344683 GSNP06396 782 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 C1orf146Q5VVC0 180 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 ANKRD13DQ6ZTN6 518 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 OTUD6AQ7L8S5 288 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 TUBGCP3Q96CW5 907 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PNMA2Q9UL42 364 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 SBNO1A3KN83 1393 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 MT-ND3P03897 115 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 TLK2Q86UE8 772 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 MAGOHBQ96A72 148 aaKnown RBP9.03□□□□□ -0.96
MCPH1-201ENST00000344683 TRAF3IP3Q9Y228 551 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 ATP8A1Q9Y2Q0 1164 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 ZMYM4Q5VZL5 1548 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 LOC102724159A0A0B4J2E5 919 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 H0YCG3 227 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PWP2Q15269 919 aaKnown RBP9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PIK3AP1Q6ZUJ8 805 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PCGF5Q86SE9 256 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 ZNF653Q96CK0 615 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 NUDT16Q96DE0 195 aaKnown RBP9.03□□□□□ -0.96
MCPH1-201ENST00000344683 SMYD2Q9NRG4 433 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 KLC4Q9NSK0 619 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 TLK1Q9UKI8 766 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PCDHB15Q9Y5E8 787 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 ABCB4P21439 1286 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 LUZP2Q86TE4 346 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PITPNM3Q9BZ71 974 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PCDHB13Q9Y5F0 798 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 GOLGA8RI6L899 631 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 SLC27A2O14975 620 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 WDR47O94967 919 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 KRT7P08729 469 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 SERPINB1P30740 379 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 CASP8Q14790 479 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 TTBK2Q6IQ55 1244 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 CHST3Q7LGC8 479 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 DEPDC1BQ8WUY9 529 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 ZFP69BQ9UJL9 534 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 TROQ12816 1431 aaPredicted RBP9.03□□□□□ -0.96
MCPH1-201ENST00000344683 E2F6O75461 281 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 TOM1L1O75674 476 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 BPIFB4P59827 614 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PNOCQ13519 176 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 SLC44A4Q53GD3 710 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 ACAD11Q709F0 780 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 NEK8Q86SG6 692 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 PROSER2Q86WR7 435 aaPredicted RBP9.03□□□□□ -0.96
MCPH1-201ENST00000344683 CNBD2Q96M20 576 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 C1orf112Q9NSG2 853 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 MCM9Q9NXL9 1143 aa9.03□□□□□ -0.96
MCPH1-201ENST00000344683 IBTKQ9P2D0 1353 aaPredicted RBP9.03□□□□□ -0.96
MCPH1-201ENST00000344683 CUL7Q14999 1698 aa9.02□□□□□ -0.96
MCPH1-201ENST00000344683 EXOC1LA0A1B0GW35 172 aa9.02□□□□□ -0.96
MCPH1-201ENST00000344683 ECEL1O95672 775 aa9.02□□□□□ -0.96
MCPH1-201ENST00000344683 SAT1P21673 171 aa9.02□□□□□ -0.96
MCPH1-201ENST00000344683 CNGA3Q16281 694 aa9.02□□□□□ -0.96
MCPH1-201ENST00000344683 GRAMD1AQ96CP6 724 aa9.02□□□□□ -0.96
MCPH1-201ENST00000344683 MTRQ99707 1265 aa9.02□□□□□ -0.96
MCPH1-201ENST00000344683 NYXQ9GZU5 481 aa9.02□□□□□ -0.96
MCPH1-201ENST00000344683 APOBEC2Q9Y235 224 aaKnown RBP9.02□□□□□ -0.96
MCPH1-201ENST00000344683 PODXLO00592 558 aa9.02□□□□□ -0.97
MCPH1-201ENST00000344683 ADCK1Q86TW2 530 aa9.02□□□□□ -0.97
MCPH1-201ENST00000344683 THAP11Q96EK4 314 aa9.02□□□□□ -0.97
MCPH1-201ENST00000344683 ZBTB18Q99592 522 aa9.02□□□□□ -0.97
MCPH1-201ENST00000344683 SYBUQ9NX95 663 aa9.02□□□□□ -0.97
MCPH1-201ENST00000344683 MYH10P35580 1976 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms